Dipodomys ordii (Ord's kangaroo rat): 105984053
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Entry
105984053 CDS
T07834
Symbol
Agrn
Name
(RefSeq) agrin
KO
K06254
agrin
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04512
ECM-receptor interaction
dord04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105984053 (Agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105984053 (Agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dord00535
]
105984053 (Agrn)
Proteoglycans [BR:
dord00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105984053 (Agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
CFAI_KAZAL
Laminin_EGF
SEA
EGF
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
105984053
NCBI-ProteinID:
XP_012869562
Ensembl:
ENSDORG00000008599
UniProt:
A0A1S3F1B6
LinkDB
All DBs
Position
Unknown
AA seq
1908 aa
AA seq
DB search
MLNSSLMRITLRNLEEVEFCVEDKPGTHFTPVPPAPPDVCRGMLCGFGAVCEPSEEDPGR
ASCVCKKSPCPLVVAPVCGSDASTYSNECELQRAQCRQQRRIRLLRRGPCGSPDPCANVT
CSFGSTCARSPDGRSASCVCPTTCPGAPEGTVCGSDGVNYPSECQLLRHACTRQEHIFRK
FNGPCDPCQGTPADPSRLCRVDPHTRRPQMLLRPESCPSQQAPVCGDDGVTYENDCVMDR
TSAARGLLVQKVHSGRCQPRDQCVEACRFGAVCLSHRGRARCSCDRVTCDGAYRPVCAQD
GRTYDNDCWRQQAECRQQRAIPAKHRGPCAQAPSPCRGVQCAFGATCTVKNGEAVCECQQ
ACSGVYDPVCGSDGVTYGSACELGAMACALGREIRVVRRGPCDRCGQCRFGALCEVETGR
CVCPSECVASAQPVCGSDGRTYASECELHVHACTHQISLHVASVGHCQTCGNTVCAFGAV
CSSGQCVCPRCEHPPPGPVCGSDGVTYGSTCELQEAACRQQMHLEEARPGPCEQPECGSG
GSGSGEDGECEQELCRQRGGVWDEDSEDGPCVCDFSCQGVLRSPVCGSDGVTYGTECDLK
KARCESQRELYVVGQGACRSTTLAPLLPEALTHCTQTPYGCCQDNVTAARGVGLAGCPGT
CRCNPHGSYGATCDPASGQCSCRPGVGGLRCDRCEPGFWNFRGIVTNGQSGCTPCSCDPW
GAVRDDCEQMTGLCSCRPGVAGPKCGQCPDGHVLGPTGCEADSRAPETCVEMRCEFGASC
VEEGGSAHCVCPVLACLEASATKVCGSDGVTYGNECQLKTIACRQRLNISTQSLGPCQEA
VPVAYPTSPGHVSSEASPPSPGTLPLAPSSSPRAWTTPAASSPPQTTASLPRTTVWPMRT
LPPTAPSTVSSLALSAFGESGSADGSGDEELSGDQEASGGGSGGLEPPDSSREVTHGLPV
ERASCYNSPLGCCSDGQTPSLDAEGSNCPATKAFQGVLELEGVEGQELFYTPEMADPKSE
LFGETARSIESALDDLFRNSDVKKDYRSVRLRDLGPGRSVRAMVDVHFDPTTAYQAPDVG
RALLRQIQASRRRALVVRKPLQEHVRFMDFDWFPAFVTGAATGATARAATVGRLPSSAVT
PVGRLPSSAVTPRAYPTHTSWPIGRTPAPPATRRPPTTAPSRGRTLPLGPHQLSLPCDSQ
PCLYGGTCQDQDSGKGFACSCPAGRGGAVCEEALRSSVPAFGGHSFLAFPTLRAYHTLRL
SLEFRALEPQGLLLYNGNARGKDFLALALLGGHVQFRFDTGSGPAVLTSLVPVEPGQWHR
LELSRHWRQGTLSVDGETPVVGESPSGTDGLNLDTDLFVGGIPEDQAAVVLERTSVGVGL
RGCIRLLDVNNQQLELGSWRGAARGSGVGECGDQACVPSPCHGGAPCRELGAGVFHCQCP
PGRFGPTCADEESPCQPNPCPGAAPCHVLPRGGAECECPPGREGALCQTVSERGSSSRPF
LADFSGFSYLELKGLHTFERDLGEKMELELVFLARDPNGLLLYNGQKTDGKGDFVSLALR
DGRLEFRYDLGKGAAVIRSKEPIALGAWTRVSVERSGRKGALRVGDGPRVLGESPVPHTM
LNLKEPLYVGGAPDFSKLARAAAVSSGFNGAIQLLSLKGQQLLTQEHMLRAVDVSSFADH
PCTQASGHPCLHGASCLPKGADYECLCPGGFSGRRCEKGLVEKSAGDLETLAFDGQTYIE
YLNAVTERKALQSNHFELSLRTEATQGLVLWSGKVTGPSDYVALAIVDGRLQLSYDLGSQ
PVVLRSTVRVNTNRWLRVRAHREQREGSLQVGNEAPVTGSSPLGATQLDTDGTLWLGGVQ
KLPVGQTLPKAYSTGFVGCLRDVVVGLRPLHLLEDAVTKPELQPCAAP
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgctcaactccagcctcatgcggatcactctgcggaacttggaggaggtggagttctgt
gtagaagacaaacccgggacccacttcacgcccgtgcctccagcacctcctgatgtgtgc
aggggaatgctgtgtggctttggggccgtgtgcgagcccagtgaggaagatccaggccga
gcctcctgcgtgtgcaagaagagtccctgccccctggtcgtggcgcctgtgtgtggctcg
gacgcctcgacctacagcaacgagtgtgagctgcagcgtgcgcagtgcaggcagcagcgg
cgcatccgcctgctccgccgcgggccctgtgggtctccggatccctgtgccaatgtgacc
tgcagcttcggcagcacctgtgcacgctcaccggacgggcggagcgcctcgtgtgtatgc
cccacgacgtgccccggggcccccgagggcacggtgtgcggaagcgatggcgttaactac
cccagtgagtgccagctgctacgccatgcctgcacccgccaggaacacatcttcaggaag
ttcaacggcccctgtgacccctgccagggtacgccagccgacccgagccgcctctgccgc
gtagaccctcacacgcggcgcccgcagatgctcctgcggccagagagctgcccttcccag
caggcgcccgtgtgtggggatgatggggtcacctacgaaaacgactgtgtcatggaccgc
acctccgctgcccgaggcctgctcgtccagaaggtgcactccggccggtgccagcctcga
gaccagtgtgtggaggcctgccggttcggtgccgtgtgcctgtcgcaccgagggcgtgcc
cgttgctcctgcgaccgggtcacctgtgacggggcctatcggcctgtgtgcgcccaggac
gggcgcacctacgacaatgactgctggcgccagcaggccgagtgccggcagcagcgcgcc
atccccgccaagcaccggggcccctgtgcccaggccccgtccccgtgccgtggggtgcag
tgtgcgttcggggcgacgtgtacggtgaagaatggggaagccgtgtgcgagtgccagcag
gcgtgctcaggcgtctacgaccctgtgtgtggcagtgacggcgtcacctacggcagcgcg
tgcgagctgggggccatggcctgcgccctcgggcgggagatccgggtggtccgcagagga
ccctgtgaccgatgtgggcagtgccgcttcggagctctctgcgaggtggagactgggcgc
tgtgtgtgcccctctgagtgtgtggcctcggcccaacccgtgtgcggctcggatgggcgc
acgtacgccagcgagtgtgagctgcacgtccacgcctgtacacaccagatcagtctccac
gtggcctctgtcgggcactgccagacctgtggaaacaccgtgtgtgcctttggggcagtg
tgctcctctggacagtgtgtgtgtcctcggtgcgagcaccccccccctggccctgtgtgc
ggcagtgacggcgtcacctacggcagtacgtgtgaactacaggaagccgcctgccggcag
cagatgcacctcgaggaggcccggccggggccgtgcgagcagccggagtgtggctcggga
ggctccggctcgggagaggacggcgagtgtgagcaggagctctgccggcagcgcggtggc
gtctgggacgaggactcggaggacgggccctgcgtctgtgacttcagctgccagggtgtc
ctgaggagcccggtctgtggctcagatggtgttacctacggcacagagtgtgacctgaag
aaggccaggtgtgagtcacagcgagagctgtatgtggtcggacaaggggcctgccgcagt
accacattggccccattgctgcctgaggccctaacacactgtacccagacaccgtatggc
tgctgtcaggataatgtcactgcggcccggggcgtgggcctggctggttgccccgggact
tgtcggtgcaacccgcatggctcctacggggccacctgtgacccggcctccggccagtgc
tcctgccggccaggtgtgggtggcctcagatgcgaccgatgtgagcccggcttctggaac
ttccgtggcattgtcaccaatggccaaagcggctgtactccctgcagctgtgacccttgg
ggtgcagtgcgggatgactgtgagcagatgaccggactgtgctcctgtaggcctggtgtg
gccggtcccaagtgcgggcagtgtccagatggtcacgtcctgggccccaccggctgtgag
gcagattcccgggcacccgagacctgtgtggagatgcgctgtgagtttggcgcctcctgt
gtggaggagggcggctctgctcactgtgtctgccccgtcctcgcttgcctggaggccagt
gccaccaaggtctgcgggtcagacggtgtcacctacggcaatgagtgccagctgaagacc
atcgcctgccgccagaggctgaacatctccacccagagcctgggcccgtgtcaggaggcc
gttcctgtggcttaccccaccagcccagggcacgtctcgagcgaggcctcgccaccttcg
cccggcaccctcccgctggctcccagtagcagcccccgggcctggaccacccctgcggcg
tcatcgcccccacagaccacagccagcctccccaggaccactgtgtggcccatgcggacc
ctgccacccacagcaccctccaccgtgtccagtctcgccctgtctgccttcggtgaatcc
ggcagtgccgacggcagtggtgatgaggagctgagtggggaccaggaggccagtggggga
ggctctgggggcctcgagcctcccgacagcagccgtgaggtaacccacgggctgcccgtc
gaaagggcttcctgctacaactcacctttgggctgctgctcggatggccagacaccctcc
ctggacgcagagggctctaactgcccggctaccaaggccttccagggagtgctggaactg
gagggggtcgaggggcaggagctgttctacacgcctgagatggctgaccccaagtcagag
ctgtttggggagactgccaggagcattgagagcgcgctggacgacctgttccggaactca
gatgtaaagaaggactaccgaagtgtccgcctgagggacctggggcctggcagatcggtg
cgcgccatggtggatgtgcactttgaccccaccacagcctatcaggcgcccgatgtgggc
cgggccttgctccgacagatccaggcgtccagacgccgggccctggtggtgaggaagcct
cttcaggaacacgtgcggttcatggacttcgactggtttccggcgttcgtcacgggagct
gcaacaggagccacagccagagcagctactgtgggccgactgccctcctcggccgtgacc
ccggtgggccgactgccctcctcggccgtgaccccacgtgcctaccccactcacactagc
tggcccatcggcaggaccccagcgccccctgccactcgacggccacccaccactgccccc
agccgtggccggactctgcctctgggtccccatcagctgtcccttccctgtgattcccag
ccctgcctgtatggggggacctgccaggaccaggactctggcaagggctttgcctgcagc
tgccctgccggcagaggaggcgccgtctgtgaggaggcgctccgctcctccgtgccagcc
tttgggggccactcctttcttgccttccctaccctgcgtgcctaccacaccctgcgcctg
tcgctggaattccgggctttggagcctcagggacttctgctctacaatggcaatgcacgc
ggcaaggacttcctggcactggcactgctgggtgggcatgtgcagttcaggtttgataca
ggttcagggccagcagtgctgaccagcttggtgccggtggagcccgggcagtggcaccga
ctggaactgtcacgacattggcgccagggcacgctctccgtggatggcgagaccccagtg
gtgggtgagagtcccagtggcaccgatggcctcaacctggacacggacctctttgtgggc
ggcatcccagaggaccaggctgccgtggtgcttgagaggacctcggttggtgttggcctg
aggggctgcatccgcctgctggacgttaacaaccagcagctggagctcggcagctggcgg
ggggcggcccgaggctctggcgtgggcgagtgtggcgaccaagcctgtgtgccgagcccc
tgccacggtggggctccgtgccgggagctgggagctggcgtgttccactgccagtgcccg
cctggccgcttcggtcccacgtgtgcagatgaagagagcccctgccagccaaacccctgc
ccgggggcagcgccctgccacgtcctgcccaggggtggggccgagtgcgagtgtcccccg
ggacgtgagggggccctctgccagacagtctcagagaggggttccagctctcgacccttc
ctggctgacttcagtggcttctcctacctggaactgaaaggcttgcacacctttgaaaga
gacctgggggagaagatggagctggagctggtgttcctggcccgtgaccccaacggcctg
ctcctctacaatgggcagaagaccgatggcaagggggactttgtgtccctggcactgcgc
gatgggcgtctggagttccgctatgatctgggcaagggggctgcagtcatcaggagcaag
gaacccatagccctgggtgcctggaccagggtctccgtggagcgaagtggccgcaagggc
gccctccgtgtgggcgacgggccccgcgtactgggggagtcgccagtgccgcacaccatg
ctgaacctgaaggagccgctctatgtgggcggcgctccggacttcagcaagctggctcgg
gccgccgcggtgtcgtctggctttaacggtgccatccagctgctctccctcaaaggccag
cagctgctgacccaggagcacatgctgcgggcggtggatgtctcatcctttgcagatcac
ccttgtacccaagcctcagggcacccctgcctccacggggcctcgtgtctcccaaagggg
gccgactatgaatgcctgtgtcctgggggcttctcagggcggcgctgcgagaagggactg
gttgaaaaatcggcaggggacctggagacactggcctttgatggacagacctacattgag
tacctcaatgcagtgaccgagagaaaggcgctccagagcaaccactttgagctgagcctg
cgcaccgaggccactcaggggctagtcctgtggagcggcaaggtcacggggccttcggac
tatgtggccctggccattgtggatggacgcctgcagttgagctacgacctgggctcccaa
cctgtggtgctgcgctccaccgtgagggtcaacaccaaccgctggctgcgggtcagggct
cacagggaacagagggaaggctcccttcaggtgggcaacgaggccccggtgacgggctcc
tcccctctgggagccacacagctggataccgacgggaccctgtggcttggaggcgtgcag
aagctgcctgtgggccagaccctgcccaaggcctacagcacaggcttcgtgggctgcctg
cgggatgtcgtggtgggcctgcgcccgcttcatctgctggaagatgcggtcaccaagcca
gaacttcagccctgcgctgccccctga
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