Dipodomys ordii (Ord's kangaroo rat): 105988964
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Entry
105988964 CDS
T07834
Symbol
Frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105988964 (Frem1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
105988964
NCBI-ProteinID:
XP_012876209
Ensembl:
ENSDORG00000014455
UniProt:
A0A1S3FJK0
LinkDB
All DBs
Position
Unknown
AA seq
2039 aa
AA seq
DB search
MNAPRWARPEALLLLLLLDWTSSTFITVNRGMRVMKGSSAVLSAEDLKFAIPREKDACKV
EVVRNEPITQRVGKLTPQVFDCHFLPNEVRYVHNGCPILDEDTVKLRLYRFTETDTFMET
FELQVHLLEPDCNIIHMNDKVLEVSEFYGLSRTIDKNLLSFDYDRTANLECTIRLDPLTT
LLPAHGQMVVVEPLPEGPRGDQPHSFFPESQLGTELKCPGGSCALGLKKIGSLKVSCEEF
LLMGLRYQHMQPPSPNIDYIPIQLDLMDSRSKIVYKIELEVLDFFFGKSAPIVVHISIRT
ADTNAPRVSWNTGLDLLEGQSRAITWEQFQIVDNDDIGAVQLVTVDGLRHGRLTVRGEKG
FLFTVADLQAGVVRYHHDDSDSTKDFVVFRIFDGFHSTRHKFPINILPKDDSPPFLITNV
VIELEEGQTILIQGSMLRASDMDSSDDYIFYNITKPPQAGEIMKKPGPGLTGYPVQGFLQ
RDLFNGIISYRHFGGEIFEDSFEFVLWDSHEPPNLSGPQVVTIHIIPVDDQLPKEAPGVS
RHLVVKETEVAYITKKHLHFLDMESCDRELLYTVTTPPFFSFGPRHSDAGKLFMVDSIPK
LTKNPVALGLRSFTQHAVNHMKVAYMPPMQDIGPHLQHVQFTVSISNQHGGTLHGICFNI
TILPVDNQVPEVFTNSLRVAEGRQCIVDTEHIHVSDVDTLLDNIYLSLTGTPLSGRVELN
GFPLNPGDTFSWSDLHTLKVRYQHDGSEVLQDDICLEVTDGKNSAEFVLHVEVFPVNDEP
PVLKADLIAVMPCLEGGEVVITPEYLGATDMDSDDLTLVFMIVGEPRHGMVRKAGVSVDR
FSQADVISGAVTYRHTGGEIGLVPCFDTITLVVLDGEASPVINGCCYHRPDPSALHEAFP
VYDLNITVHPVDNQPPSIEIGTMFVVDEGFSAAITINHLSVTDPDTAADDLEFVLVSPPQ
FGYLENTLPSAGFEKSNMGISISSFQWRDMKSLHINYVQSKHLRIEPTADQFVVSVTDGS
QRSSETSFYIRINPTNDEAPDFVVQNLTVCQGGMVELDSSIISAADLDIPKDHLLFSISQ
KPHHGLLIHGGPSENTPPNNQLANPHQKHELIHNFSMDLLKTGLKLSYVHDGSEGLADDF
AVQLSDGKHKIVKMISVEVFPVNDEKPTLSKKAEVVVNVGDTRILSSAVLSAIDKDSPRE
KIYYLFEKLPQNGQLQLKIRRGWVPLSPGMKCTQMDVDLNLLRYTHTGAIDSHDGDSFTF
YLWDGDNRSPAYDCHITIKDMGKGDIVILAKPLVVSKGDRRILTTSTLLAVDATDRPEEL
VYVITSPPQHGQVEYVRYPGVPITSFSQMDVAGQTVCYVHMSKAAVCHDSFRFIISNGLQ
TKHGVFEIILETVDKALPVVTRNKGLRLAEGAMSLLSPDQLQVTDPDTSAENLTFILDQL
PQHGQLYLRGSVLIQLNFTQQDVDSRKVAYQHSGGHSHTDCFTFVVTDRTNRGFVVDGRV
QEEPVSFTIQVDQLDKTAPRITHLHFPSQVSLLKNGCYGIYITSHVLKASDPDTEDDEII
FKILRGPLHGHLENTTTDLEAIWICREVLMGLCLLCLELKWSHIEWSQSEYEVCENVGML
TLEVTRRGYSMDSAFVSIKVNQVSATVGKDFTVTPSKLIQFDPGMSTKMWNIAITYDGLE
EDDEVFEVILNSPVNAVLGTKTKAAVKILDSKGGQCLTSYSSNHSQHKAWEKGVWPFLPS
GSSSSIPGGFPHLERRYPSSSKQLVVTKGSTLRSFDAAVLSQRKLRTHGNGKAVLPSSVY
KNGTDIIYNYHGVVSLRLEDDSFPTHKRKATVSILSQPHRRVKAAELPLAETESTSASHF
PRQNQLPSFPKNCMVEIKGLLHFEESNQKLYQCNGIAWKIWSPQTKEVEDKSCPAGWHLH
SGYCHTLITGQKSTWALATRACREQHLGNLVTVFSRQHMQWLWHISGKKPFWIGLNDQEH
AGRWVWIGGEPVVFTNWRRGRPQNSRPGKNCVLVQKQGKWQTKNCGKGKPHNFICSWKL
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctccacgctgggcccggcccgaggccctgctgctgctcttgctcctggactgg
accagctccaccttcatcactgtgaaccgagggatgagggtgatgaagggcagttccgcc
gtcctgtcggcagaagacctgaagtttgccatccccagggagaaagacgcctgcaaagtg
gaggtggtgaggaacgagccgataacccagagggttggaaagctcaccccacaggtcttt
gactgccatttccttcccaatgaagtaaggtatgttcacaatgggtgtccgatccttgat
gaagatactgtgaagcttaggctttacagatttactgaaacagacacattcatggaaacc
tttgagctgcaggtccatctcctagaaccagactgtaacatcatccacatgaatgacaaa
gtgctggaggtgtctgaattttatggcctgtccagaaccatcgataagaacctgctcagc
tttgattatgacaggacagccaacctggaatgtaccatcaggctagaccccctgacaacc
ctgctgccagcccatggccaaatggttgtggtggaacctcttccagaaggacctcgtgga
gatcagccacacagttttttccccgagtcccaactgggaacagaactgaagtgtccaggt
ggaagctgtgccctgggattgaagaaaataggaagtctcaaagtgagctgtgaggagttc
ctgctgatggggcttcgttatcaacatatgcagcccccttcccccaacattgattatatc
cccatccaactggacctcatggacagcaggagtaaaatcgtgtacaagattgagctggag
gtgttggacttcttctttgggaagagtgcccccatcgtagtccacatttccatccgaaca
gcagacaccaatgctccccgagtgtcctggaatacaggtctggacctcctggaggggcag
tctcgggccatcacctgggaacagtttcagattgttgacaatgatgacattggtgctgtc
cagttggtcactgtcgatggcctgcggcatggacgccttaccgtaagaggggagaaagga
ttcctcttcactgtggctgaccttcaagctggagttgttcgctatcatcacgatgacagc
gactccaccaaagactttgtggtattcaggatattcgatggttttcacagcacccgccac
aaatttcccatcaatatcttacccaaagatgacagtcctccattccttataaccaatgtt
gtgattgaactggaagaggggcagaccatcctgatccaagggtccatgctgagagcttca
gacatggactccagtgatgactacatcttctataatatcacaaagcccccacaggctgga
gagatcatgaagaagccagggccaggactgacaggctaccctgtccaaggcttccttcag
agggatctgtttaatggaatcatttcctatcgtcacttcggtggagaaatatttgaagat
tcttttgaatttgtcctgtgggacagccatgagcctccaaatctgtcagggccacaggtc
gtgacaatccatatcattccagtagatgaccagcttccaaaagaggctcctggagtctct
cgacatttggttgttaaggaaacagaggtggcctacataaccaagaagcatctacatttc
ctagatatggaatcatgtgacagagagctgctctacacagtaacaacacctccatttttc
tctttcggccccagacactcggatgctgggaagttattcatggtggacagcataccgaag
ctaaccaaaaacccagtagccctgggattaaggtcatttactcagcatgctgtgaaccat
atgaaagtagcctacatgccccctatgcaagatattgggccccatctccaacacgtccag
tttacagtttctatcagtaaccaacatggtggcactttgcatgggatatgctttaacatt
accattcttccagtggacaatcaagttcctgaggtcttcaccaactctctgagagtggct
gagggacgtcaatgcatcgtggacacagagcacatccatgtttctgatgtggacacccta
ctggacaatatctacctctctctgacagggaccccgctgagtggaagggtggagctgaat
ggatttcccctaaatccaggggatacattttcttggagcgaccttcataccttaaaagtt
aggtatcaacatgatggatctgaggttcttcaggatgacatatgtttggaggtcacagat
ggcaaaaattcagcagaatttgttctacatgttgaggtattccctgtaaatgatgagcca
ccagtcctaaaggctgacctcatagccgttatgccttgccttgagggtggagaggtggtc
atcacccctgaatatcttggtgctactgacatggacagtgatgacttgacactggtgttt
atgattgttggagaacctcggcatgggatggtgaggaaggctggagtgagcgtggacagg
ttctctcaggccgatgttatctcaggggcagtgacatacagacacacaggtggtgagatt
ggcctggtaccttgttttgacaccattacattggtggttttggatggagaagccagccct
gttatcaatggctgttgctaccacaggcctgatccatcagctcttcatgaagcctttcca
gtgtatgatctcaatatcacagtgcatccagtagacaatcaaccaccttccattgaaatt
ggtaccatgttcgttgtagatgaaggcttctctgcagccattaccattaaccacttgtct
gtcactgaccctgacactgctgcagatgacttggaatttgttttggtttctcctcctcaa
tttggctaccttgaaaacacactcccttctgctggttttgagaaaagcaacatgggcatc
agtatatcttcatttcagtggagagacatgaagtctttgcacattaactatgtgcaatcc
aagcatctgaggatagaaccaactgccgatcagttcgtggtctctgttacagacgggtca
caacgctcctctgagacatcattttacattcgaatcaaccccaccaatgatgaggcccct
gactttgtagtgcagaaccttaccgtgtgccagggtggaatggtagagctggattcttcc
atcatcagtgctgctgacctggacattcctaaggaccacttactcttcagcatctctcag
aaaccacatcatggtctcctcatccatgggggacccagtgaaaacactcctccaaataac
cagctagccaaccctcaccagaaacatgagctcatccataacttttccatggaccttctt
aagactggactgaagctgtcatatgtgcacgatggctcagagggcctggctgatgacttt
gcagtccagttgtcagatgggaaacacaagatagttaaaatgatttcagtagaggtcttt
ccagttaatgatgagaaaccaacattaagcaagaaggctgaagttgtggtgaatgtgggt
gatactcgtatcctgtcaagtgctgtcctttctgcaatagataaagactcccccagggag
aagatttactatttatttgaaaagcttccccaaaatggacaacttcaacttaagataagg
aggggctgggtccctctctcccctggcatgaaatgcacccagatggacgtggatctgaac
ttgctgaggtatacacacacgggggcaattgactcccacgatggagatagctttaccttc
tacctctgggatggtgacaacagatcacctgcatatgattgtcacatcaccattaaggac
atgggaaaaggtgacatcgtcattcttgcaaaaccactggtggtgtctaaaggtgatcgg
cggatcctgacgacctccacgctcctggctgtggatgcaacagacaggcctgaggaactg
gtgtatgtcatcacctccccgccacagcatggccaggtggaatatgtccgctatcctgga
gttcccatcacaagcttcagtcaaatggatgttgcaggacagacagtttgctacgttcac
atgagcaaggcagcagtttgccatgacagcttcagattcatcatcagtaatggactgcag
acaaagcatggggtgtttgaaatcatactggagactgtggacaaagccttgcctgtggta
accagaaacaaagggctgaggttggctgaaggggccatgagtctgctctcccctgaccaa
ctccaagtgactgacccagatacctctgcagaaaacctcaccttcatcctggatcagctc
ccacagcatggccagctctacctaagggggtcagtgctgatccaactcaatttcactcag
caggatgtggacagcaggaaggtggcctatcagcattcaggaggtcactctcacacagac
tgctttacttttgtggtcacagataggacaaaccgtggctttgttgtggatgggagagtg
caggaagagcctgtttcattcaccattcaggtagaccagttggacaaaacagccccccgg
atcacacacttgcatttcccttctcaagtgagcctcctaaaaaatggctgttatgggatt
tacatcacttcccatgtgctgaaggcatcagaccccgacactgaggatgatgagattatc
tttaagattttacgaggtccactacatggacatctggagaacacaacaacagaccttgag
gccatttggatctgtcgagaggtgttgatgggtctatgtttgttatgtttggagttgaag
tggtctcatattgaatggtcacagtctgaatatgaagtctgtgaaaatgtgggtatgttg
accttggaagttaccagaaggggctattccatggattcggccttcgtgagcataaaggtc
aaccaagtgtcagcgacagttggaaaagatttcacagtgactccatccaaactcattcag
tttgatccaggaatgtcaactaagatgtggaatatagcaattacctatgacggattagag
gaagatgatgaggtctttgaagtaattctgaactcccctgtgaatgcagttcttggcacg
aagacaaaagctgcagtgaaaattttggactcaaaaggaggacagtgcctgacttcctat
tcctctaaccacagccagcacaaggcatgggaaaagggtgtttggccctttttgccctct
ggctcctcctcatccattcctggtggtttccctcatctggaaagaagatacccttcatct
tctaagcagctagtggtcaccaaggggagcaccctgcggagctttgatgctgcagttctt
tctcagaggaagctcaggacccatgggaatggcaaggcagttttaccatcctctgtttat
aaaaatggaacagacatcatctataattaccatggggtggtttctttgagactggaagat
gacagttttcccactcacaaaaggaaggctacagtatccatcctgagtcagccacacagg
agagtcaaagcagcagagctgcctctggcagagacagaatccacaagtgcctcacacttc
cccagacagaaccagttgccatcattcccaaagaattgcatggtggagataaagggactc
ctccattttgaagaaagtaaccagaaactgtatcaatgcaatggaattgcctggaaaatc
tggagcccccaaaccaaggaggtggaagacaaatcctgcccagctggatggcaccttcac
tcaggctactgccataccttgatcacgggacagaagagcacctgggccctggccacgcga
gcttgcagggaacaacacctgggcaaccttgtcactgtattctccaggcaacacatgcag
tggttgtggcacatcagtggaaaaaaacccttttggataggattgaatgaccaagagcat
gctggccgctgggtgtggattggtggtgaacctgttgtcttcaccaactggaggagaggg
cgccctcaaaactcaaggcctggaaagaattgtgttttggtgcaaaaacaagggaaatgg
caaacaaagaactgcgggaagggcaagcctcacaattttatttgttcctggaaactttaa
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integrated database retrieval system
