Dipodomys ordii (Ord's kangaroo rat): 105994176
Help
Entry
105994176 CDS
T07834
Symbol
Pms1
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dord03400
]
105994176 (Pms1)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105994176 (Pms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HMG_box_2
HATPase_c
Motif
Other DBs
NCBI-GeneID:
105994176
NCBI-ProteinID:
XP_012883063
UniProt:
A0A1S3G2M6
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MAIHINLFIVKLKENYGFDKIEVRDNGEGIKAVDTPVMAVKYYTSKINSHEDLENLTTYG
FRGEALGSICCVAEVLITTRTAADNFSTQYVLDGSGHILSQKPSHLGQGTTVTALRLFKN
LPVRKQFYSTTKKCKDEIKKIQDLLISYGIIKPGLRLVFVHNKAVIWQKSRVADHKMALM
SVLGTSVMGNMESLQYHSEEAQIYLSGFFPKHDADHSSTSLSTPERSFIFINSRPVHQKD
ILKLVRRYYSLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALEN
LMMTFYGPVPSTNSHENDKTDVSSAETVEADVLFNKIETSGNKCPNGDIETIASQKGVHN
DESQKTTDHCLNHQINSSDDHFNSENSDISKNTRNIVEKNIRNNLSWEDIQSEGSEACFK
GSIKHIELENSSKSHIDDSGKHKEALSPEKSLDICAEDWSKGNLLNSIGENIEPVKILVP
QNSLACRISDNDQGLEQKSLSDGSCSKKSNVIDNKSGQLTAYDLISNRVIKKPMSASAIF
IQDHRAQFLTENPKTSLEDAAVQIEELWKTLTKEEKLKYEEKATKDLERYNTQMKKAIER
ESQMSLKDNRKKIKPTSTWSLAQKHKLKTSLSNQPKLDELFQSQNEKKRSKNIKIIEIPF
SMENLKINFEKQKEFDSEEKDELCLIHNLRFPDAWLVASKTEVMLLNPYRVEEALLFKRL
LENHKLPAEPLDQPIILTESLFNGSHYLEILCKMASNNQRCSGSTYLSDPRLTANGFKIK
LIPGVSITESHLEIEGIANCLPFYGVTDLKEILDAILNKNAKEIYECRPRKVISYLEGEA
VRLSRQLPMYLPKEDIKNTIYRMKHQFANEIKGKRHHHAFVV
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggccatacacattaatctttttatagtcaagcttaaggagaactatggatttgataaa
atagaggtgagagacaatggtgagggtatcaaggctgttgatacacctgtaatggcagtg
aagtactacacttcaaagataaacagtcatgaagatctggaaaacctgacaacttatggt
tttcgtggggaagccttaggttcaatttgttgtgtggcagaggttttaattacaacacga
acagctgctgataattttagcactcagtatgttttagatggcagtggtcacatactttct
caaaaaccttcacatcttggtcaaggtacaactgtaactgctttaaggttatttaagaat
cttcctgtaagaaagcaattttactcaaccactaaaaaatgtaaagatgaaataaaaaag
atccaggatctcctgataagctatggtatcataaaacctggtttaaggcttgtctttgta
cataataaggcagttatttggcagaaaagtagagtagcagaccacaagatggccctaatg
tcagttctggggacttctgttatgggcaacatggaatccttacagtaccattctgaagaa
gctcagatttatcttagtggattctttccaaagcatgatgctgaccacagttccacaagt
ctttcaaccccagagagaagtttcattttcataaatagtcgaccagtacatcaaaaagac
atattaaagttagtccgacgttattacagtcttaaatgcctaaaggaatccactcgtttg
tatccagttttctttctgaaaatagatgttcctacagctgatgtggatgtaaatttaaca
ccagataaaagtcaagtattattacagaataaggaatctgttttaattgctcttgaaaat
ctgatgatgactttttacggaccagtacctagtacaaattctcatgaaaatgataaaaca
gatgtttcctcagctgaaacagtagaagcagatgtgctttttaataaaatagaaacatct
ggaaataaatgtccaaatggtgatattgaaactatagcttcccaaaaaggtgtacataat
gatgaatctcaaaaaaccactgatcattgtttaaatcaccaaataaatagtagtgatgat
cattttaatagtgaaaattctgacatcagtaagaacactagaaatatagttgaaaaaaac
ataaggaataacttatcctgggaggatatccaaagtgaaggtagtgaagcttgtttcaaa
ggttctattaagcatatagaattagaaaatagcagtaaaagccatatagatgatagtggg
aagcataaagaagcattgtctcctgaaaagtctttagatatttgtgcagaggactggagc
aagggaaatttacttaattcaattggagagaatattgaacctgtgaaaattttagtgcct
caaaacagtttagcttgcagaataagtgataatgatcaaggccttgaacaaaagagtctc
agtgatggttcctgtagtaaaaaatcaaatgtaatagataataagtcaggacagcttacg
gcttatgacttaattagtaatcgcgtgatcaagaaacccatgtcagcaagtgccattttt
attcaagatcatcgtgctcagtttctcacagaaaatcctaagaccagtttggaggatgca
gcagtacaaattgaagaactgtggaagacattgactaaagaggaaaagttgaaatatgaa
gaaaaggcaactaaagatttggaacgatacaatactcaaatgaagaaagccattgaacga
gagtcacaaatgtcattaaaagataacagaaaaaagataaaacccaccagcacctggagt
ttggcacagaaacacaagttgaaaacttcattgtctaatcagccaaaacttgatgagctc
tttcagtcccaaaatgaaaaaaaacggagtaaaaatattaaaataatagagatacctttt
tcaatggaaaacttaaaaataaactttgagaaacaaaaggagtttgactcagaagagaag
gatgaactttgcttaatccacaatcttaggtttcctgatgcatggctagttgcatctaaa
acagaggtaatgttactgaatccatacagggtagaagaagccctgctatttaaaagactt
cttgagaatcataaacttcctgcagagccgctggaccagccaattatacttacagaaagt
cttttcaacggatctcattatttagagattttatgtaaaatggcatcaaataaccaaaga
tgcagtggatcgacttacctctctgatcctcgtctcacagcgaatggttttaagataaag
ttgataccaggagtttccattactgaaagccacttggaaatagaaggaattgctaattgt
ctcccattctatggagtaacggatttaaaagaaattctcgatgctatactaaacaaaaat
gcaaaggaaatttatgaatgtagacctcggaaagtgataagttatttagagggagaagca
gtacgtctatctagacaactacctatgtacttaccaaaagaggacatcaaaaatacaatc
tatagaatgaagcatcagtttgcaaatgaaattaaaggaaaaagacatcaccatgcattt
gttgtgtaa
DBGET
integrated database retrieval system