Dipodomys ordii (Ord's kangaroo rat): 105996865
Help
Entry
105996865 CDS
T07834
Symbol
Vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105996865 (Vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dord01007
]
105996865 (Vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dord03016
]
105996865 (Vars2)
Enzymes [BR:
dord01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
105996865 (Vars2)
Amino acid related enzymes [BR:
dord01007
]
Aminoacyl-tRNA synthetase
Class I (U)
105996865 (Vars2)
Transfer RNA biogenesis [BR:
dord03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105996865 (Vars2)
Prokaryotic type
105996865 (Vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
tRNA-synt_1
Anticodon_1
Helicase_C_3
tRNA-synt_1g
tRNA-synt_1_2
Tfb2_C
tRNA-synt_1e
tRNA-synt_1f
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
105996865
NCBI-ProteinID:
XP_012886562
UniProt:
A0A1S3GEZ5
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MENTPARGGLNRVHLQCKNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSSEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAAG
GPVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASG
ITAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGKWLLVAQSKFLA
RGRAVTREVLGVLIADMYLWCRKGGEICEQLRALGASLDWDRECFTMDAGSSEAVTEAFV
RLYNAGLLYRNCQLVNWSCALRSAISDIEVENRPLRGRTELRLPGYPTPVSFGLLVSVAF
PVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDSRYTHLHGRQLRHPLTGQLLPLITDPAV
QPQVGTGAVKITPAHSPADAEMGARHGLSPLTVIAEDGTMTSLCGDWLQGLHRFVAREKI
MCALRERGQFRGLQDHPMVLPICSRSGDVVEYLLKSQWFVRCQEMGDRAAQAVESGALEL
CPSFHQKSWQHWFAHIGDWCVSRQLWWGHRIPAYLVTEGHGKDDKDCWVVGRSEAEARQA
AAELTGRPGTELTLERDPDVLDTWFSSALFPFSALGWPQKTPDLAHFYPLSLLETGSDLL
LFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGRKMSKSLGNVLDPRDIISGVELQVLQ
AKLRDGNLDPAELAFAAAAQKKDFPHGIPECGTDALRFALCSHGVLGGDLHLSVSEVLSC
RHFCNKIWNALRFILNALGENFVPQPSEELSPTSPMDAWILSRLALAARECERGFLTQEL
SLVTHTLHHFWLHNLCDVYLEAVKPVLLCKPRPPEPLQVLFSCADVGLRLLAPLMPFLAE
ELWQRLPQRPGGFSAPSICVAPYPSAHSLEHWRHPELEQRFSQVQEAVQMLRALRATYQL
TKARPQVLLQTLEPGEQGLFQAFLEPLGTLSHCGAVSFLPPGAAAPSGWAQATLSDTVEV
YMELQGLVDPQTQLPRLATRRLKLQKQLDGLMAWTPSEGEAETQKQQRLSALQLELSKLD
QAASHLQQLMDEAPSPREL
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacccctgcaaggggtggactgaaccgggtgcacctacaatgcaagaatcta
caggaattcttagggggcctgagtcctggagtattggatcgattgtatgggcaccctgcc
acttgtctggctgtgtttagggagctcccgtctctggctaagaactgggtgatgcggatg
ctctttctagagcagcctttgccgcaagctgctgtagccctgtgggtgaagaaggaattc
agcaaggctcaggaggaaagtacagggctgctgagtggcctccgtatctggcacacccag
ctgctccctggtggcctccagggcctcatcctgaacccaatcttccgccagaacctccga
attgcccttctgggtggggggaaggcctggtctgatgacacaagtcagctgggaccagac
aagcacgctcgggacgttccctcacttgacaagtacgccgaggagcgatgggaggtggtc
ttgcacttcatggtgggctcccccagtgcagctgtcagccaggacctggctcaactcctc
agccaggctgggctcatgaaaagtagtgaacctggagagccaccctgtattacttctgct
ggcttccagttcctgttgctggacacccctgcccagctctggtactttatgcttcagtat
ctgcagacagcccagagccggggcatggatctggtggagattctgtctttcctcttccag
ctcagcttctctactctaggcaaggattactctgtggaaggtatgagtgattctttgttg
aacttcctgcaacatctgcgagagtttgggcttgttttccagaggaagaggaaatctcgg
cgttactaccccacacgcctggccatcaacctttcatctggtgtctctggggctgctggg
ggtcctgtgcatcagccaggcttcattgtcgtggaaaccaattaccggttgtatgcctac
acagaatcagagctgcagatcgccctcattgccctcttctctgagatgctctatcgcttc
cccaacatggtggtggcacaggtgacccgggagagtgtgcagcaggccattgccagtggc
atcacagcccagcagataatccatttcctaaggacaagggcccacccagtgatgctcaaa
cagaccccggtgctgccccccaccatcacagaccagattaggctatgggagttggaaagg
gacagactccgattcactgaaggtaagtggcttctagtggcccagtccaagttcctggcc
agaggaagagcagttactcgggaagttctgggtgtgttgattgctgacatgtatctctgg
tgcaggaaaggaggagagatctgtgagcagttacgtgctctgggggcctccctggactgg
gatcgggagtgttttaccatggatgctggttcttcagaggctgtgactgaagctttcgtg
cgactctacaatgcagggttgttgtacaggaactgtcagcttgtcaactggtcatgtgct
ttaagatcagccatctcagatattgaggtggaaaaccggcctctacgtggacgcacagaa
ctccggctgcctggctatcccacccctgtgtcttttggcctccttgtttctgttgccttt
cctgtggatggagagcctgatgcagaggtagtagtgggaaccacaagaccagaaacattg
cctggagatgtggctgtagctgttcaccctgatgactcccgttacacacatctacatggg
cgacagctccgtcaccccctgacagggcagcttctccccctcatcacagaccctgctgtt
cagccgcaggtgggcacaggagcagtgaaaatcactccagctcacagtcctgctgacgct
gagatgggggcccggcatggcttgagccccctgaccgtcattgcggaggatgggaccatg
acctcactctgtggggactggctgcagggtcttcaccggtttgtggcccgggagaagatt
atgtgtgcactgagggagcggggccagttccggggcctccaggaccaccccatggtactg
cccatatgcagccgttctggggatgtggtggaatacctactgaagagtcagtggtttgtt
cgctgccaggaaatgggggaccgagctgcccaggctgtggagtcaggggccttggagctc
tgtccatccttccaccagaagagctggcagcactggttcgctcacattggggactggtgt
gtctcccggcagctgtggtggggccatcggattccagcctaccttgtcactgaggggcat
gggaaggatgacaaggactgctgggtggtggggcggtctgaggcagaggccagacaggca
gcagcagaactgactgggagaccaggaacagagctgaccctggagagggaccccgatgtc
ctggacacttggttctcttctgctctctttcccttttctgccctgggctggccccaaaag
actccagaccttgcgcatttctaccccctgtcacttttggaaacgggcagtgaccttctg
ctgttctgggtgggccgaatggtcatgctggggacccagctcacggggcagctccccttt
agcaaggtgcttcttcattccatggttcgggacaggcagggccggaagatgagcaagtcc
ttggggaatgtgctggatccacgggacatcatcagtggtgtggagctgcaggtgttgcag
gccaagctaagagatgggaacctggaccccgcagagctggcctttgcagctgcagcacag
aaaaaggactttcctcatgggatacctgaatgtgggacagatgccctgagattcgcactg
tgctctcatggagtcctggggggcgacctgcacctgtctgtctctgaggtcctgagctgc
cgccatttctgcaacaagatctggaatgccctgcgttttattctcaatgccctaggggag
aattttgtaccccagccttcagaggagctgtctcccacctcccccatggacgcctggatc
ctgagccgcctggcccttgctgcccgcgagtgtgagcgtggcttccttacccaggagctc
tccctggtcacccataccctgcatcacttctggctccacaacctctgtgatgtctacctg
gaagctgtgaagccagtgctgttgtgcaagccccgtccccctgagccacttcaggtccta
ttctcctgcgcagatgttggtctccgcctcctggccccactgatgcccttcctggctgaa
gagctctggcagaggctgccccaaaggccaggtggcttctctgctcccagcatctgtgtt
gcaccctaccctagtgcccacagcttggagcactggcgccatcctgagttggagcagcgc
ttctcccaggtccaggaagccgtgcagatgcttcgagctcttcgagccacctaccaactc
accaaagcccggccccaagtactgctgcagaccttggagccaggggagcagggcctcttc
caggccttcctggagcccctgggcaccctgagccactgtggagctgtgagcttcctgccc
ccaggtgcagcagctccctcaggctgggcccaggccaccctcagtgacactgttgaggtc
tacatggagttgcagggcctggtagacccccagactcagctacctcggctagccacccga
agactcaagttgcagaagcagcttgatggcctcatggcttggaccccatcagaaggggag
gcagagacacagaagcagcaaaggctttccgctctccagctggaattgtcaaaactggac
caggcggcctctcacctccagcagctgatggatgaggctcccagccccagagagctttga
DBGET
integrated database retrieval system
