Dipodomys ordii (Ord's kangaroo rat): 106000905
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Entry
106000905 CDS
T07834
Symbol
Supt5h
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106000905 (Supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dord03021
]
106000905 (Supt5h)
03019 Messenger RNA biogenesis [BR:
dord03019
]
106000905 (Supt5h)
Transcription machinery [BR:
dord03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106000905 (Supt5h)
RNA polymerase I system
106000905 (Supt5h)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
106000905 (Supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
106000905
NCBI-ProteinID:
XP_012891576
Ensembl:
ENSDORG00000016582
UniProt:
A0A1S3GRY7
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAKEEEAEEEEEEEEEEYDEEEEEEDDDR
PPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGARRL
QNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCK
IGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNL
RLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISL
KMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGNR
YSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTEGTGKEREHNFQPGDN
VEVCEGELINLQGKVLSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRF
EGDTGLIVRVEESFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPR
TVGVIVRLERETFQVLNMHGKVVTVRHQAVTQKKDNRFAVALDSEQNNIHVKDIVKVIDG
PHSGREGEIRHLYRSFVFLHCKKLVENGGMFVCKMRHLVLAGGSKPRDVTNYTLGGFAPM
SPRISSPMHPSAGGQHGGFGSPGGGGMGSGRGRRDNELIGQTVRISQGPYKGYIGVVKDA
TESTARVELHSTCQTISVDRQRLTTVDSWRPGGMASSYGRTPMYGSQTPMYGSGSRTPMY
GSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPS
PQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPS
PQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHT
PGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVVSISS
EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLEA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagcgaagacagcaacttctctgaagaagaggacagcgaacgcagcagtgat
ggcgaggaggccgaggtagaggaagagagacggagtgcaaaggaagaggaggctgaggaa
gaagaggaggaggaggaagaggagtatgatgaagaagaagaagaggaagatgatgaccgg
ccccccaagaaaccccgccatggcggcttcatcctggatgaggctgatgtggatgatgag
tatgaggacgaagaccagtgggaggacggagctgaggacatactggagaaagaagagatt
gaagcctccaatattgataatgtggtcctggatgaagaccgctctggggcccgccgcctg
cagaatctctggagggaccagcgcgaagaagagctgggcgagtattacatgaagaaatac
gccaagtcatctgtgggcgagacggtatatggagggtctgatgagctctcagatgacatc
acccagcagcagctgctccccggagtgaaggaccccaatctgtggactgtcaaatgtaag
attggagaggaacgagccacagccatctccttgatgcgcaagttcatagcctaccagttc
acagacacgcccctgcagatcaagtcagtagtggccccagaacatgtcaagggctacatc
tacgtggaagcctacaagcagacacacgtgaagcaggccatcgagggcgtgggcaacctg
cggcttggctactggaaccagcagatggtgcccatcaaggagatgacggatgtgctcaaa
gtggtcaaggaggtggccaacctaaagcccaagtcctgggtgcgcctcaagcgaggcatc
tacaaagatgacattgctcaggtggactatgtggaacccagccagaacactatctctctg
aagatgatccctcggatcgactatgaccgcatcaaggcccgcatgagcttgaaagactgg
tttgccaagaggaagaagttcaagcggcctccacagaggctctttgatgctgagaagatc
aggtctctagggggtgacgtggcctctgatggcgacttcttgatctttgagggaaatcgc
tacagccggaagggctttctgttcaagagcttcgccatgtcagctgtgatcactgagggc
gtgaagcccactctgtcggagctggagaagtttgaggaccagccagaaggcattgacctg
gaggtggtgacagagggcacagggaaggaacgagagcacaacttccagcctggggacaat
gtggaagtgtgcgagggtgagctcatcaacctgcagggcaaggtcctcagtgtggacggc
aataagatcaccatcatgccgaagcacgaggacctcaaggacatgctggagttcccagcc
caggagctccgcaagtatttcaagatgggtgaccacgtgaaggtgatcgctggccgattt
gagggggataccggcctcattgtgcgtgtggaggagagcttcgtcattctcttctccgac
ctcaccatgcacgagctgaaggtgctccctcgggacctgcagctctgctcagaaacggcc
tcaggtgtggatgttgggggccagcacgagtggggagagctggtgcagctggacccacgc
actgtgggcgtcatcgtgcggctggagcgggagaccttccaggtgctgaacatgcatgga
aaggtggtgacagtcaggcaccaggctgtgacccaaaagaaggacaaccgcttcgctgta
gccctggactccgaacagaacaacatccacgtgaaggacatcgtcaaggtcattgacggc
ccccactcaggccgggagggtgagatccgccacctgtaccgcagcttcgtcttcctgcac
tgcaagaagctggtggagaatggcggcatgtttgtctgcaagatgcgccacctggtgctg
gctgggggctcaaagcctcgagatgtgaccaactacaccttgggtggctttgccccaatg
agcccgcggatcagcagccccatgcaccccagcgctggaggtcagcatggtggcttcggc
agcccgggcggtggtggcatgggcagtggccgaggacggagagacaatgagctcattggc
cagactgtccgcatctcccaggggccctacaaaggctacattggtgtggtgaaggatgcc
acggagtccacggcccgcgtggagctgcattctacctgccagaccatttctgtggaccgc
cagcggctcaccacagtggactcgtggcgtccaggagggatggcctcgtcctatgggcgg
acgcccatgtacggctcccagacgcccatgtatggctctggctcccgcacgcccatgtac
ggctcccagacccctctgcaggacggcagccgcaccccacattacggctcacagacaccg
ctgcatgatggcagccgcacccctgcccagagtggagcctgggaccccaacaaccccaac
acgccatcaagggctgaggaggagtacgagtatgcctttgacgatgagcctaccccatcc
ccccaggcctacgggggaacccccaacccccagactcccggctacccagatccttcatca
cctcaggtcaaccctcagtataacccccagacaccagggacgccagccatgtacaacacg
gaccagttctccccctacgctgccccctccccacaaggctcctaccagcccagccccagt
ccccagagctaccaccaggtggcgccaagccctgcaggctaccagaacacccactctcct
gccagctaccacccaacgccctcacccatggcttatcaggcaagccccagtccgagcccg
gtaggctacagccccatgacacctggggcaccctcccctggtggctacaaccctcacaca
ccaggctcaggcattgagcagaactccagcgactgggtaaccactgatatccaggtgaag
gtgcgagacacctatttggacacacaggtggtagggcagaccggtgtcatccgcagtgtc
acgggtggcatgtgctctgtgtacctgaaggacagcgagaaggtcgtcagcatctccagt
gagcacctggagcccatcacccccaccaagaacaacaaggtgaaggtgatcctcggtgag
gaccgtgaagccacgggagtcctgctgagcattgatggtgaggacggcatcgtccgcatg
gaccttgacgagcagctcaaaatcctcaacctccgcttcctggggaagctcctggaagcc
tga
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integrated database retrieval system
