KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0532200-01
Entry
Os01t0532200-01   CDS       T02163                                 
Symbol
Os01g0532200
Name
(RAP-DB) FF domain domain containing protein.
  KO
K12821  pre-mRNA-processing factor 40
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Os01t0532200-01 (Os01g0532200)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dosa03041]
    Os01t0532200-01 (Os01g0532200)
Spliceosome [BR:dosa03041]
 Complex A
  U1 snRNP components
   U1 related factors
    Os01t0532200-01 (Os01g0532200)
 Complex B
    Os01t0532200-01 (Os01g0532200)
SSDB
Motif
Pfam: FF
Other DBs
RAP-DB: Os01t0532200-01
LinkDB
Position
chr01:complement(join(19185666..19185746,19185385..19185465,19185202..19185294,19185076..19185129,19184870..19184986,19184691..19184789,19184285..19184332,19184103..19184195,19183831..19183938,19182742..19182806,19180703..19180805,19180192..19180518,19178861..19178995))
AA seq 467 aa
DERFSAVERPREREDLFESYLMELQKKERARAAEEHKRHIAEYRAFLESCEFIKTSTQWR
KVQERLEDDERCSRLEKIDRLEIFQEYIRDLEKEEEEHKRIHKEQVRRQERKNRDEFRKM
LEEHVAEGMLTAKTRWRDYCAQVKDSSVYLAVASNISGSMPKDLFEDVMEELEKQYQDDK
ARIKEAVKSGKIPMTTSWTLEDFETAVTEDDTLKGITNINMKLIFDDQVERLREKEVKEA
KKRQRLGENFSDLLYSIKEISASSTWDDSKALFEDSQEYKALDSETYSRELFEECVVHLK
ERLKEKERLREEEKARKEKEREEKERRKEKEKKEKERKEKERDKEKEREKDKGKDRSRKD
EMDIDAVDADSHGSKDKKREKDKEKKHKRHHHDTADDVSSERDEKDDSKKSRRHSSDRKK
SRKHTHASDSDSENRHKRHKKDRDSSRRNGTRDDLEDGELGEDGEIH
NT seq 1404 nt   +upstreamnt  +downstreamnt
gatgaacggtttagtgctgttgagcgtccaagggagcgtgaagacttatttgagagctat
cttatggaactacagaagaaggaaagagccagggctgctgaagagcacaaaaggcacata
gcagaatatagagcttttctcgagtcatgtgaattcataaagacaagtacccagtggaga
aaagttcaagaacgtcttgaggatgatgaacgctgttcccgacttgaaaagatcgatcga
ctggagattttccaagagtatataagggatctggagaaagaagaggaagagcacaagcgg
atacataaggaacaagtaaggaggcaagagcgcaaaaatcgtgatgaatttcgcaagatg
ttggaagaacatgtagctgaaggaatgcttactgcaaaaactcgttggcgtgattactgt
gcccaggttaaagattcctctgtgtacttggctgtggcctcgaacataagtggttcaatg
ccaaaagatctgtttgaagatgtaatggaggagcttgagaaacagtatcaagatgacaaa
gcccgaattaaagaagcagtgaagtctggaaagattcctatgacgacttcatggacacta
gaggatttcgaaactgctgttacggaggatgatactttgaaaggaataacaaacataaac
atgaagcttatttttgatgatcaagttgaaaggctcagggaaaaggaggtaaaggaagca
aagaagcgccagcgtctgggtgaaaatttctcagatcttttgtactcaatcaaggaaata
tcagcttcttcaacatgggatgattctaaagcactattcgaagatagccaagagtacaag
gcattggacagcgaaacatactctagagagcttttcgaagagtgcgttgtccacttgaaa
gaaaggttaaaagagaaagagcgcttgagggaggaagaaaaggcaagaaaagagaaggaa
cgtgaagagaaagaacggaggaaagagaaagaaaagaaggagaaagaacgcaaagaaaaa
gaaagagacaaggagaaagaaagagaaaaggacaaaggaaaggatcggtcgaggaaagat
gagatggatattgatgctgttgatgcagatagccatggctcaaaagacaagaaaagagaa
aaggacaaggaaaagaagcataagagacaccaccatgacactgcagatgatgtgagctct
gaaagggatgagaaggatgactctaaaaagtctcgtagacatagcagtgatcgcaagaaa
tcaaggaagcatacccatgcttcggactctgatagtgaaaatcggcacaaaagacacaaa
aaggatcgagatagctcccgcagaaatggcacacgtgatgaccttgaagatggtgaactt
ggagaagatggggagattcattag

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