Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0625300-01
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Entry
Os01t0625300-01 CDS
T02163
Symbol
Os01g0625300, HEAT_STRESS_TRANSCRIPTION_FACTOR_C1A, HSFC1A
Name
(RAP-DB) Similar to Heat shock transcription factor 31 (Fragment).
KO
K09419
heat shock transcription factor, other eukaryote
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os01t0625300-01 (Os01g0625300)
Transcription factors [BR:
dosa03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
Os01t0625300-01 (Os01g0625300)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
DUF3437
SHE3
Motif
Other DBs
RAP-DB:
Os01t0625300-01
Oryzabase:
8568
LinkDB
All DBs
Position
chr01:join(24967510..24967764,24967844..24968608)
AA seq
339 aa
AA seq
DB search
MDGLHTELALGLIGCCGGDGQQQTAPFVAKTYQMVCDPRTDALVRWGRDNNSFVVVDPAA
FSQLLLPCFFKHGNFSSFVRQLNTYGFRKVHPDRWEFAHESFLRGQTHLLPRIVRRKKRG
EGGGGGGGASCSFGGGAGEHQVAAAAASVGMSGEEEDAAEDVLAKEAALFEEVQRLRHEQ
TAIGEELARMSQRLQATERRPDQLMSFLAKLADDPNAVTGHLLEQAAERKRRRQHLPSHE
PTVCPLPPAPPPQPPQPLLALAGAAAMDGTYWWTTEHHHHHHHQMKPMTVLPSLEPPTAS
CGVHQVPELGGGGVMGLTTDGEAKVEPPFPFCLLGQAFF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctgcacacggagctcgcgctggggctgatcgggtgctgcggcggcgacggg
cagcagcagacggcgccgttcgtggcgaagacgtaccagatggtgtgcgacccgcggacg
gacgcgctcgtccggtgggggagggacaacaacagcttcgtcgtcgtcgaccccgccgcc
ttctcgcagctcctcctcccctgcttcttcaagcacggcaacttctccagcttcgttcgc
caactcaacacctacggattccggaaggttcaccctgaccggtgggagttcgcgcacgag
tcgttcctgcgcggccagacgcacctgctgccgcgcatcgtgcgccgcaagaagcgtggc
gagggcggcggtggcggtggcggcgcgtcctgctctttcggtggcggcgccggcgagcac
caggtggctgctgctgcggccagcgtgggaatgtcgggagaggaggaggatgcggcggag
gacgtgctggccaaggaggccgcgctgttcgaggaggtgcagaggctgcggcacgagcag
acggccatcggggaggagctggcgcggatgagccagcggctgcaggcgacggagcggcgg
cccgaccagctcatgtccttcctcgccaagctcgccgacgaccccaacgccgtcacgggc
cacctcctcgagcaggccgccgagaggaagcgccggcgccagcacctcccttcccacgag
cccaccgtctgtcccctcccgccggcgccgccgccacaacctccgcagccgctcctggct
ctcgccggcgccgcggccatggacggcacctactggtggacgacggagcatcatcatcat
catcatcatcagatgaagcccatgacggtgttgccatccttggagccgcccaccgctagc
tgcggcgtgcaccaagtgccggagctcgggggtggcggcgtgatgggcttaacgacggac
ggtgaggccaaggtggagccgccattcccattctgtctacttggtcaagctttcttttaa
DBGET
integrated database retrieval system
