Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0122300-01
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Entry
Os02t0122300-01 CDS
T02163
Symbol
Os02g0122300
Name
(RAP-DB) Translation initiation factor eIF3 subunit domain containing protein.
KO
K03245
translation initiation factor 3 subunit J
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dosa03009
]
Os02t0122300-01 (Os02g0122300)
03012 Translation factors [BR:
dosa03012
]
Os02t0122300-01 (Os02g0122300)
Ribosome biogenesis [BR:
dosa03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
Os02t0122300-01 (Os02g0122300)
Translation factors [BR:
dosa03012
]
Eukaryotic type
Initiation factors
eIF-3
Os02t0122300-01 (Os02g0122300)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF3_subunit
HDOD
Motif
Other DBs
RAP-DB:
Os02t0122300-01
LinkDB
All DBs
Position
chr02:complement(join(1176773..1176785,1175647..1175768,1175005..1175156,1174673..1174823,1174429..1174588,1174224..1174321))
AA seq
231 aa
AA seq
DB search
MEDWDSEDFQPAVPSAKAEPLKSKWADEDVEEDDVKESWEEEEEEKPKPPPVEKTAPKPS
GKGAAKKGKQQASTSSEVVQDEALDDPALEKLRQQRLVEEADFKSTTELFGKKDGSEKSL
DTFIPKSESDFAEYAELIANKLRPYEKSFHYMGLLKNVMRLSMASLKGADAKDISSSIAA
IANEKIKAEKEAAAGKKKQGAKKKQLHIENKDDDFIPGKGNFDDPDEYDFM
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggaggactgggattctgaagactttcagcccgcagtgcctagtgcaaaagctgagccg
cttaaaagtaagtgggcagatgaagatgtggaagaagatgatgtaaaagaatcatgggaa
gaagaggaggaggagaaacctaaaccaccacctgtagaaaagactgcaccaaaacctagt
gggaaaggtgctgcgaagaaaggaaaacaacaagcatcaactagttctgaagtagttcaa
gatgaggctctggatgatcctgctctagagaaacttcgtcaacaaaggcttgtggaagaa
gctgactttaagtcaactacggaactttttggaaagaaggacggcagtgaaaagtcccta
gataccttcatcccaaagtctgagagtgactttgcggaatatgcagagcttattgcaaac
aaactgcgtccctatgagaaaagcttccactatatgggtctactcaagaatgtcatgaga
ctttccatggcatcattgaaaggtgcggatgcgaaagatatatcgtcctccattgcagca
attgctaatgaaaagatcaaggctgagaaagaagctgcagcaggcaaaaagaaacaaggg
gcaaaaaagaagcagctacacattgagaataaagacgatgatttcatccctggaaagggt
aattttgatgatccggatgagtacgatttcatgtga
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