KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0804900-01
Entry
Os02t0804900-01   CDS       T02163                                 
Symbol
Os02g0804900, RIBONUCLEOTIDE_REDUCTASE_LARGE_SUBUNIT_2, RNRL2
Name
(RAP-DB) Ribonucleotide reductase, Chloroplast biogenesis
  KO
K10807  ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00230  Purine metabolism
dosa00240  Pyrimidine metabolism
dosa00480  Glutathione metabolism
dosa01100  Metabolic pathways
dosa01232  Nucleotide metabolism
Module
dosa_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
dosa_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Os02t0804900-01 (Os02g0804900)
   00240 Pyrimidine metabolism
    Os02t0804900-01 (Os02g0804900)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    Os02t0804900-01 (Os02g0804900)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os02t0804900-01 (Os02g0804900)
Enzymes [BR:dosa01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Os02t0804900-01 (Os02g0804900)
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Os02t0804900-01 (Os02g0804900)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone
LinkDB
Position
chr02:join(34328401..34328628,34328729..34328790,34328880..34328967,34329512..34329775,34329853..34330093,34330179..34330255,34330344..34330514,34330591..34330683,34330764..34330913,34330998..34331084,34331163..34331327,34331407..34331526,34331751..34331953,34332054..34332203,34332286..34332433,34332553..34332636,34332714..34332815)
AA seq 810 aa
MYVVKRDGRQEAVHFDKITARLKRLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLGELA
AETAAAMTASHPDYASLAARIAISNLHKTTMKSFSETIKVMYMHYDERSGLLAPLIADDV
YEIIMKNTTRLDSEIIYDRDFDYDYFGFKTLERSYLLKVVGKVVERPQHMLMRVSIGIHK
DDIESAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMNDDSIEGIYDTLSECAT
ISKCAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY
LEPWHADIFEFLDLRKNHGKEENRARDLFYALWIPDLFMERVQNNENWSLFCPNEAPGLA
DCWGDEFQNLYKKYEREGKAKKVVSAQALWFDILKAQIETGTPYMLYKDSCNRKSNQQNL
GTIKSSNLCTEIIEFTSPTETAVCNLASIGLPRFVREKGVPMESHPAKLVGSNGSKNRYF
DFDKLAEITSIVTRNLNKIIDTNYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS
TEAQQLNKDIFETIYYHALKASAEIAAKEGPYETYSGSPVSKGILQPDMWNVVPSDRWNW
SDLREMISKVGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
LHDLTEMGIWSPVLKNKIVYEDGSVQKISEIPDDLKAIYRTVWEIKQKTIVDMAIDRGCY
IDQSQSLNIHMDQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKDKQ
HNAEEEDVQSKMAEVVCSLNNRDECLACGS
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgtacgtggtgaagcgcgatgggcggcaggaggcggtccacttcgacaagatcaccgcg
cggctcaagaggctcagctacggcctcagccaggagcactgcgatccggtcctcgtcgcg
cagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcggcgagctcgcg
gcggagaccgccgccgccatgaccgcctcccaccccgactacgcctcgctcgccgcgagg
atcgcgatctcgaacctgcacaagaccaccatgaagtctttctcagagacgataaaggtc
atgtacatgcattacgatgagcgatctgggctgttggctcctctgattgccgatgacgtc
tatgagatcatcatgaagaataccacccgcttggacagtgagataatttatgacagagat
tttgactatgactactttggttttaagacccttgagagatcttatctgttaaaagttgtt
gggaaggttgtggaaagaccacagcatatgctaatgagagtttctattgggatacacaag
gatgatattgaatctgctatcaaaacgtaccacatgatgtctcagcgctggtttactcat
gcttcgccaacccttttcaatgctggcactccaaggcctcaattaagtagctgcttcctc
atctgcatgaacgatgatagcattgagggaatttatgatactctctcagaatgtgctacc
ataagcaaatgtgctggtggaattggtctctcaattcacaatattagagctactgggagt
tacattcgaggaacaaatggaacatctaatgggattgttcccatgctgcgtgttttcaat
gatactgcacgttatgttgatcaaggcggaggcaagagaaaaggtgcatttgctatatac
ttggagccttggcatgctgatatttttgagttccttgatttaagaaagaaccatggaaag
gaggagaatcgtgcaagagatcttttctatgcgctctggattccagatctgttcatggaa
agggtgcaaaataatgaaaactggtcattgttttgtcccaatgaagctccaggtttggct
gactgttggggagatgagtttcagaatctgtacaagaaatatgaaagagagggcaaggca
aagaaagttgtttcagcacaggcgctctggtttgacattttgaaggcacagatagaaact
ggaacaccatatatgctttataaggattcttgtaatagaaaaagtaaccaacaaaacctg
gggacaattaagtcttcaaacttgtgcacggagattattgagttcacaagtcccactgaa
actgctgtgtgcaatctagcatcgattggtttaccgcgttttgtaagggaaaagggtgtt
cctatggagtctcatccggctaagcttgttggtagtaatggatccaaaaaccgatatttt
gactttgataaattagctgagattacttcaattgtcacaaggaatctcaataaaataatt
gatactaattattaccctgttgagactgcaaagagatcaaatatgaggcacaggccaatc
ggaatcggtgttcagggcttggcagacaccttcattttacttggcatgccatttgattca
acagaggctcagcaattgaacaaggatatttttgagactatttattatcatgccttgaaa
gcttctgctgaaattgctgcaaaagaaggtccttatgaaacttatagcgggagccctgtc
agcaagggcattcttcaacctgatatgtggaatgtagttccatctgatagatggaattgg
tcagatttaagggagatgatttccaaagttggagttaggaactctcttcttattgctcca
atgcctaccgcttctactagtcaaattcttggcaacaacgaatgctttgaaccatacacc
tcaaacatatacagtcggagagttttaagtggcgagtttgttgtagtaaacaagcatctt
ctccatgatttgactgagatgggtatttggtcccctgttctgaaaaacaagattgtctat
gaagatggttctgttcaaaagatctctgagatcccagatgatctgaaagcaatttacaga
accgtgtgggaaatcaagcagaaaactattgttgacatggccatcgatcgtggttgttat
atcgatcagagccaaagtcttaatatccacatggaccaaccgaactttgggaagctaact
tccctgcacttccacgcttggtccaagggcctgaaaactggaatgtattatctaagaaca
cgcgctgctgccgatgcaatcaaattcacagtggacactactctcctcaaggataagcag
cataatgcagaggaagaggatgtccagtctaaaatggcagaggtggtgtgttccttgaac
aaccgggacgaatgcttggcatgtggtagttag

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