Oryza sativa japonica (Japanese rice) (RAPDB): Os04t0550800-01
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Entry
Os04t0550800-01 CDS
T02163
Symbol
Os04g0550800, TONOPLAST_INTRINSIC_PROTEIN_5;1, TIP5;1
Name
(RAP-DB) Major intrinsic protein family protein.
KO
K09873
aquaporin TIP
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dosa02000
]
Os04t0550800-01 (Os04g0550800)
Transporters [BR:
dosa02000
]
Other transporters
Aquaporins and small neutral solute transporters [TC:
1.A.8
]
Aquaporins
Os04t0550800-01 (Os04g0550800)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIP
YqhR
Motif
Other DBs
RAP-DB:
Os04t0550800-01
Oryzabase:
8387
LinkDB
All DBs
Position
chr04:complement(join(27576796..27576919,27576432..27576684,27575934..27576366))
AA seq
269 aa
AA seq
DB search
MANICANMKRCFSPPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAV
AQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHY
ISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGA
LVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGHYSNQAVYWAGPMVGAAVAALVHQA
LVFPTVPEPAPAPATNESARHGSVQTVVV
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatctgtgccaacatgaagcgctgcttctcgccgccggcgctccgggcgtac
ttcgccgagttcttctccaccttcctctttgtgttcatcgccgtcggctccaccatctcc
gcccggatgctcacgccggatgaaacatccgatgcctcgtccctgatggcgaccgccgtt
gcgcaggcgttcgggctcttcgccgcggtgttcatcgccgccgacgtctccggcggccac
gtcaaccccgccgtgacgttcgcctacgccatcggcggccacatcaccgtcccgagcgcc
atcttctactgggcgtctcagatgctcggctccacgttcgcctgcctcgtcctccactac
atctccgccggccaggccgtgccgacgacgaggatcgcggtggagatgaccgggttcggg
gcggggatcctggagggggtgctcacgttcatggtggtgtacacggtgcacgtcgccggc
gacccgcggggtggaggcttcggcggcaggaaggggcccgcggcgacggcgctgggcgcg
ctggtggtcggggccgtgacgggcgcgtgcgtgctggcggcggggtcgctcacgggcgcg
tcgatgaacccggcgcgctcgttcgggccggcggttgtcagcgggcactacagcaaccag
gccgtgtactgggccggcccgatggtcggcgcggcggtggcggcgctggtgcatcaagcc
ctggtcttcccgaccgtgccggagccggcgccggcgccggcgacgaacgagtcggcgcgc
catgggagcgtgcaaacggtggtcgtgtga
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integrated database retrieval system
