Oryza sativa japonica (Japanese rice) (RAPDB): Os06t0193200-01
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Entry
Os06t0193200-01 CDS
T02163
Symbol
Os06g0193200
Name
(RAP-DB) Similar to Pectin methylesterase 8 (Fragment).
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectinesterase
PMEI
PGA_cap
PBP1_TM
Motif
Other DBs
RAP-DB:
Os06t0193200-01
LinkDB
All DBs
Position
chr06:join(4700552..4701614,4702252..4702946)
AA seq
585 aa
AA seq
DB search
MAAISPRLVVFVAVLLLLLLATATTTQCHRHGKRHRHHAVAAKGAAAAAATPGVTDVHAV
CRTTPHQDSCLASTAAHLDAVSAEVVAAASAISVQLLPPNILSVALASLRGALAAVSSLS
PALSSALSPPSSGASPLRRGAAQDCLELHAATLASLSRSASLLASPGEGLPAVRAHLAAA
LANKATCLDGLDGAAPSSGLLASLDDAYAHVTNSLSLVAGRRGGGGSAASFAAAVANIIH
HNRRLLDDDDNDDYNGGNDDDDNSNNSGENTVVITVAKDGSGNYRTVGEAVAAAPNNSAA
RTVIRVRAGTYEENVEVPPYKTNIALVGDGRGATVITGSRSAADGWTTFRSATFGVSGEG
FMARDVTFRNTAGAAKGQAVALRVSADMAAAYRCGVEGHQDSLYAHSFRQFYRECAVSGT
VDLVFGDAAAVLQACELVAGAPVAGQSNVLTAQARGDPNEDTGFSVHNCTVVASPELLAS
GVSTRTFLGRPWRPYARAVVMDSYLGPLVDRAGWVEWPGAEPGRAETVYFGEYGNGGPGA
AMDGRVGWAGFHDMGYDEAAQFSVDNLISGDQWLAATSFPYDDDV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatctcgccacgtctggttgtgttcgtcgccgtcctcctcctcctcctcctc
gccacggcgaccaccacgcaatgccaccgtcacggcaagcgacaccgccaccacgccgtc
gccgccaagggcgccgcggcggcggcggccacgccgggggtgacagacgtccatgccgtc
tgccgcacgacgccgcaccaggactcctgcctcgcgtcgacggccgcgcacctcgacgcc
gtctccgcggaggtggtggcagcggcgtcggccatctcggtgcagctgctcccgccgaac
atcctgtccgtcgcgctcgcgtcgctccggggcgcgctcgccgccgtgtcgtcgctctcc
ccggcgctctcctccgcgctctcgccgccgtcgtcgggcgcgtccccgctccggcgcggc
gcggcgcaggactgcctcgagctccacgccgccacgctcgcctccctgtcgcggtccgcc
tcgctgctcgcgtcccccggcgagggcctccccgccgtgcgcgcccacctcgcggcggcg
ctcgccaacaaggccacctgcctcgacgggctcgacggcgccgcgccgtcgtccggcctc
ctcgcgtccctcgacgacgcctacgcccacgtcaccaactccctctccctcgtcgccggc
cgccgcggcgggggcggatcggcggcgagcttcgccgccgccgtcgccaacatcatccac
cacaaccgccgcctcctcgacgacgacgacaacgacgactacaacggcgggaacgacgac
gacgacaacagcaacaactccggcgagaacacggtggtgatcacggtggcgaaggacggg
agcgggaactaccggacggtgggggaggcggtggcggcggcgccgaacaacagcgcggcg
aggacggtgatccgagtgagggccgggacgtacgaggagaacgtggaggtgccaccgtac
aagacgaacatcgccctcgtcggcgacggccgcggcgccaccgtcatcaccggcagccgc
agcgccgccgacggctggaccaccttccgctccgccaccttcggggtgtcaggcgaaggg
ttcatggctcgggacgtgacgttccggaacacggcgggggcggcgaaggggcaggcggtg
gcgctgcgggtgagcgcggacatggcggcggcgtaccggtgcggcgtcgagggccaccag
gactctctctacgcgcactcgttccgccagttctaccgcgagtgcgccgtctccggcacc
gtcgacctcgtcttcggcgacgccgccgccgtcctccaggcgtgcgagctcgtcgccggc
gcccccgtcgccggccagtccaacgtcctcacggcgcaggcgcgcggcgaccccaacgag
gacacgggcttctccgtgcacaactgcacggtggtcgcctcgccggagctcctcgccagc
ggcgtcagcacgcgcaccttcctgggccggccgtggcggccctacgcccgcgccgtcgtc
atggactcctacctcggcccgctcgtcgaccgggccggctgggtcgagtggcccggcgcc
gagcccggccgcgccgagacggtgtacttcggtgagtatgggaatggcgggccgggcgcc
gccatggacggccgcgtcggatgggccgggttccatgatatgggctacgacgaggcggcc
cagttctccgtcgacaacctcatctccggcgaccagtggctcgccgccacctccttcccc
tacgacgacgacgtctaa
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