Oryza sativa japonica (Japanese rice) (RAPDB): Os08t0489300-01
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Entry
Os08t0489300-01 CDS
T02163
Symbol
Os08g0489300
Name
(RAP-DB) Methyladenine glycosylase domain containing protein.
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Os08t0489300-01 (Os08g0489300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os08t0489300-01 (Os08g0489300)
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
Os08t0489300-01 (Os08g0489300)
DNA repair and recombination proteins [BR:
dosa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Os08t0489300-01 (Os08g0489300)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adenine_glyco
PI-PLC-Y
Motif
Other DBs
RAP-DB:
Os08t0489300-01
LinkDB
All DBs
Position
chr08:join(24186734..24187178,24187819..24187876,24187963..24188046,24188150..24188289,24188599..24188891)
AA seq
339 aa
AA seq
DB search
MLTTSSHSRHHHAFERSPNHSMMKNIADRNKHDLLQSAMNHAASKYMQRIYPLGIQRSSS
NLTLSSLSLSQNSNDSSLSSSNSSWEPKVPLLYGGTFSPWGDVLVSLERRREEDDDKVSD
HDVEGGEEDFDCSEPGSLHRCSWITKNSDEAYVQFHDECWGVPVYNDNRLFELLALSGML
IDHNWTEILKRRDMYREAFADFDPSTVAKMDENDVAEISGNKELKLAECRVRCIIENAKC
IQKVAKEFGSFSGYIWGHVNHRPTVGRYKHHKYIPFRTPKSEAVSKDLVRRGFRLVGPVI
VYSFMQASGIVIDHLVDCFRFPECLHLADRSWGITNVAA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccacatcatcacatagcaggcaccaccatgcatttgagaggagccccaaccac
agcatgatgaagaacatagcagacaggaacaagcatgatcttcttcagagtgccatgaac
catgcagcaagcaagtacatgcagaggatctaccctctggggatccagaggagcagctcc
aacctcacactctcatcactctccctgtcacagaactccaatgattcttcactcagcagc
tcaaactctagctgggagcccaaggtgcccctgctgtatggtggcacatttagcccctgg
ggtgatgtgcttgtgtccctggagaggaggagggaagaagatgatgacaaggttagtgat
catgatgttgaggggggagaagaggattttgattgcagtgagcctgggagcttgcatagg
tgcagctggatcaccaagaacagtgatgaggcgtacgttcagtttcacgacgagtgctgg
ggtgtcccagtgtacaacgacaaccgtctgttcgagctgcttgcgttgtcaggcatgctc
atcgaccacaactggactgagatactcaagagaagagacatgtacagggaagcgttcgcg
gacttcgatcccagcacggtggcgaagatggacgagaacgacgtcgcggagatcagcggc
aacaaggagctcaagctggccgagtgcagggtccggtgcatcatcgagaacgccaaatgc
attcagaaggtggcgaaggagtttgggtcgttcagcggatacatatgggggcacgtgaac
caccggccgacggtggggaggtacaagcaccacaagtacatcccgttccggacgcccaag
tcagaggcggtgagcaaggacctcgtccgccgcggcttccgcctcgttggccccgtcatc
gtctactccttcatgcaggcctccggcatcgtcatcgaccacctcgtcgactgcttccgc
ttccctgaatgcctccacctcgccgaccgctcctggggcattaccaacgtcgctgcctaa
DBGET
integrated database retrieval system