Oryza sativa japonica (Japanese rice) (RAPDB): Os08t0564300-01
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Entry
Os08t0564300-01 CDS
T02163
Symbol
Os08g0564300
Name
(RAP-DB) ABC transporter-like domain containing protein.
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Os08t0564300-01 (Os08g0564300)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dosa02000
]
Os08t0564300-01 (Os08g0564300)
04147 Exosome [BR:
dosa04147
]
Os08t0564300-01 (Os08g0564300)
04090 CD molecules [BR:
dosa04090
]
Os08t0564300-01 (Os08g0564300)
Enzymes [BR:
dosa01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
Os08t0564300-01 (Os08g0564300)
Transporters [BR:
dosa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
Os08t0564300-01 (Os08g0564300)
Exosome [BR:
dosa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Os08t0564300-01 (Os08g0564300)
CD molecules [BR:
dosa04090
]
Proteins
Os08t0564300-01 (Os08g0564300)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
AAA_16
AAA_22
Zeta_toxin
AAA_29
APS_kinase
AAA_25
DUF1983
ABC_ATPase
SbcC_Walker_B
RsgA_GTPase
AAA_15
Motif
LinkDB
All DBs
Position
chr08:join(28264517..28264566,28264819..28265670,28265765..28266295,28267448..28268841,28269850..28269881)
AA seq
952 aa
AA seq
DB search
MEEEIKGRVVVLGADAAADGLDYVLMTLGTLGALVHGCSLPVFLRFFADLVDSFGSHAAH
PDTMLRLVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIRYLHAALHQDVSFF
DTDVRTSDVIHAINADAVVVQDAISEKLGNLIHYLATFVSGFVVGFTAAWQLALVTLAVV
PLIAVIGGLSAAALAKLSSRSQDALSDASGIAEQALAQIRIVQSFVGEERVMRAYSAALA
VAQRIGYRSGFAKGIGLGGTYFTVFCCYALLLWYGGHLVRRAHTNGGLAIATMFSVMIGG
LALGQSAPSMAAFAKARVAAAKIFRMMEHKPSMEREGGVELEAVTGRVELRDVEFSYPSR
PDVGILRGLSLSVPAGKTIALVGSSGSGKSTVVSLIERFYEPNAGTILLDGHDLRDLNLR
WLRRQIGLVSQEPALFATTIRENLLLGRDGATQEELEEAARVANAHSFIVKLPDAYNTQV
GERGLQLSGGQKQRIAIARAMLRNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLV
IAHRLSTIRKADLVAVLQGGAISEVGTHDELMARGDGTYARLIRMQEQAHEAALVAARRS
SARPSSARNSVSSPIITRNSSYGRSPYSRRLSDADFITGLGLGVDSKQQQQQHYFRVQAS
SFWRLAKMNSPEWGYALVASLGSMVCGSFSAIFAYVLSAVLSVYYAPDAAYMDRQIAKYC
YLLIGMSSAALLFNTVQHLFWDTVGENLTKRVRERMLAAVLRNEIAWFDMEDNSSARIAA
RLALDAQNVRSAIGDRISIIVQNSALMLVACTAGFVLQWRLALVLLAVFPLVVAATVLQK
MFLKGFSGDLERAHARATQIAGEAVANVRTVAAFGSEAKIVGLFEANLAGPLRRCFWKGQ
IAGSGYGVAQFLLYASYALGLWYAAWLVKHGVSDFSKTIRVFMLLLDVLRMN
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagataaagggccgcgtcgtcgtcctcggcgccgatgccgccgccgacggc
ctcgactacgtcctcatgaccctgggcacgctgggcgccctcgtccacggctgctccctc
ccggtcttcctccgcttcttcgccgacctcgtcgactccttcggctcccacgccgcccac
ccggacaccatgctccgcctcgtcgtcaagtacgccttctacttcctcgtcgtcggcgcc
gccatctgggcctcctcctgggccgagatctcctgctggatgtggaccggcgagcggcag
tccacccggatgcgcatccgctacctccacgccgccctccaccaggacgtctccttcttc
gacaccgacgtccgcacctccgacgtcatccacgccatcaacgccgacgctgtcgtcgtc
caggacgccatcagcgagaagctcggcaacctcatccactacctcgccaccttcgtctcc
ggcttcgtcgtcggattcaccgccgcctggcagctcgccctcgtcaccctcgccgtcgtc
ccgctcatcgccgtcatcggcggcctcagcgccgccgcgctcgccaagctctcctccagg
agccaggacgcgctgtccgacgccagcggcatcgcggagcaggcgctggcgcagatacgc
atcgtgcagtcgttcgtgggcgaggagcgggtgatgcgggcctactcggcggcgctggcc
gtggcgcagcggatcggctaccgctccggcttcgccaagggcatcggactgggcggcacc
tacttcaccgtcttctgctgctacgcgctgctcctctggtacgggggtcacctcgtccga
cgcgcccacaccaacggaggcctcgccatcgccaccatgttctcagtaatgataggcggc
ctggctcttgggcagtcggctccgagcatggcggcgttcgccaaggcgcgggtggcggcg
gcgaagatattccggatgatggagcacaagccgagcatggagcgggagggcggggtggag
ctggaggcggtgacggggcgggtggagctgcgggatgtggagttctcgtacccgtcgcgg
ccagacgtggggatcctgcgggggttgtcgctgagcgtgccggcggggaagacgatcgcg
ctggtggggagctccgggtcagggaagagcacggtggtgtcgctgatcgagaggttctac
gagcccaacgccgggaccatcctgctggacggccacgacctgagggacctcaacctgcgg
tggctgcgccgccagattggtctggtgagccaggagccggcgctgttcgccaccaccatc
cgggagaacctgctgctggggagggacggcgccacgcaggaggagttggaggaggccgcc
agggtcgccaacgcccactccttcatcgtcaagctccccgacgcctacaacacgcaggtt
ggggagcgcgggctgcagttgtcgggcgggcagaagcagcggatcgccatcgcgcgcgcc
atgctccggaacccggccatcctgctgctggacgaggccaccagcgcgctggactcggag
tcggagaagctggtgcaggaggcgctggaccgcttcatgatcgggcgcaccacgctggtg
atcgcgcaccgcctctccaccatccgcaaggccgacctcgtggccgtcctccagggcggg
gccatctccgaggtgggcacgcacgacgagctcatggcccgcggggatggcacctacgcc
aggctcatccgaatgcaggagcaggcgcacgaggccgcgctcgtcgccgctcgccggagc
agcgcgcgaccatccagcgcccgcaactccgtcagctcgcccatcatcacgcgtaactcc
tcctacggccgttccccctactcccgccgcctctccgacgccgacttcatcaccggcctc
ggcctcggagtcgacagcaagcagcagcagcagcagcactacttccgcgtgcaggccagc
tccttctggcggctggccaagatgaactcgcccgagtgggggtacgcgctcgtcgcgtcg
ctgggctccatggtgtgcggctccttcagcgccatcttcgcctacgtcctcagcgccgtg
ctcagcgtgtactacgcccccgacgccgcctacatggaccgccagatcgccaagtactgc
tacctcctcatcggcatgtcctccgccgccctgctcttcaacactgtccagcacctcttc
tgggacaccgtcggcgagaacctcaccaagcgcgtccgcgagaggatgctcgccgccgtg
ctccgcaacgagatcgcctggttcgacatggaggacaactccagcgcccgcatcgccgcc
aggctggcgctggacgcccagaacgtgcgctccgccatcggcgaccgcatctccatcatc
gtccagaactcggcgctcatgctggtggcctgcaccgccggcttcgtcctgcagtggcgc
ctcgcgctggtgctgctggccgtcttcccgctggtggtggccgccaccgttctgcagaag
atgttcctcaaggggttctcgggcgacctggagcgggcgcacgcgagggcgacgcagatc
gcgggagaggcggtggcgaacgtgcgcaccgtggcggcgttcgggtcggaggcgaagatc
gtggggctgttcgaggcgaacctggcggggccgctccggcggtgcttctggaaggggcag
atcgccgggagcgggtacggggtggcgcagttcctgctgtacgcgtcgtacgcgctgggg
ctgtggtacgcggcgtggctggtgaagcacggcgtgtcggacttctccaagaccatccgg
gtgttcatgctgctgctagatgttctaagaatgaattaa
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integrated database retrieval system
