Oryza sativa japonica (Japanese rice) (RAPDB): Os09t0128600-01
Help
Entry
Os09t0128600-01 CDS
T02163
Symbol
Os09g0128600
Name
(RAP-DB) CMP/dCMP deaminase, zinc-binding domain containing protein.
KO
K15442
tRNA-specific adenosine deaminase 3
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dosa03016
]
Os09t0128600-01 (Os09g0128600)
Transfer RNA biogenesis [BR:
dosa03016
]
Eukaryotic type
tRNA modification factors
Deaminases
Os09t0128600-01 (Os09g0128600)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MafB19-deam
dCMP_cyt_deam_1
APOBEC3
Motif
Other DBs
RAP-DB:
Os09t0128600-01
LinkDB
All DBs
Position
chr09:complement(join(2220089..2220149,2219958..2220009,2219086..2219159,2218223..2218344,2217510..2217592,2216043..2216124,2212882..2213343,2212681..2212787,2212411..2212603))
AA seq
411 aa
AA seq
DB search
MAWELTEVPGNPTPSLRGSTVEVIAAKIEPKLANSLIRQLSQACPLENLRHVKRVRRCCE
YGEKSELSIILCLATGPEHCSEMFPQDVKKIVGTYELNTFIAKVARFPATSKEEWEEQCK
LWPTSYHPPHDLDGVSGFKECELPSIFNCMRTALRLSEVGNAAVVVNPSTMQIIAKATDQ
TLQHDSLKSNKCAELNSDSPFSSLEVTEKKGSRLFLSNSNVSKCNSLNMEASCLNPWGWM
KPRPSEQKSLPCEGGFPWHPLRHAAIVAIENAAERDKVMFPSIISSTKPNSDGNMEYYSV
NESAKRLKVDRNDDKKIAHEAICDDLSETRPYLCTGFDIYLVWEPCSMCAMALVHQRFKR
IFYAFPNPITGALGSVYRLHGEKSLNHRYSVFRVKVPESYSNSSGDCSDKC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcatgggaactcactgaggtcccaggcaacccaactccctccctccgtggctctaca
gttgaagtgattgctgccaagattgagcccaagttagccaacagtctcattcggcaattg
agtcaagcatgcccattggagaatcttcggcatgtaaaacgggtgcgtcggtgctgtgaa
tatggtgaaaaatctgagttatcaatcatcttatgccttgcaactgggcctgaacattgt
agcgaaatgtttcctcaagatgtaaaaaagattgtaggtacctacgaattgaatactttc
attgcaaaagttgcgaggtttcctgctacttcaaaagaggagtgggaggaacaatgcaaa
ctttggccaacatcttatcatcccccacacgacttggatggtgtatctggattcaaagag
tgtgaattgccatcaatatttaattgcatgagaactgcactgcggttatctgaggtgggc
aatgctgctgttgttgttaatccatcaaccatgcagattattgcaaaggctacagaccaa
acgctccaacatgatagtttaaaaagtaacaaatgtgctgaattgaattcagacagcccc
ttctcatcacttgaagtaactgagaagaaagggagcaggttgttcctgtcaaactccaat
gtttctaaatgcaacagcctgaatatggaagcctcatgtttaaacccttggggatggatg
aaaccaaggccgtctgagcagaagtcattgccctgtgaaggtggttttccatggcaccct
ctgagacatgctgccatagttgcgattgaaaatgctgcggagagggataaagtgatgttc
ccttcaattatatcatcaaccaaaccaaattcagatggaaatatggagtattattctgtt
aatgaatcagcaaaacgactaaaggtggatagaaatgacgacaaaaaaattgcacatgaa
gcaatctgcgatgacttgtcagaaaccagaccatacctttgtacaggatttgacatttac
ctagtctgggaaccttgctcaatgtgtgcgatggcacttgtacatcaaagattcaaacgt
atcttctatgctttcccaaatccaattactggagcactgggcagtgtctacagattgcac
ggggagaaaagtttaaatcatcgttactctgtatttagggtaaaagtgcccgagtcatat
tcgaatagttcgggcgattgttctgacaaatgctga
DBGET
integrated database retrieval system