Oryza sativa japonica (Japanese rice) (RAPDB): Os09t0420300-01
Help
Entry
Os09t0420300-01 CDS
T02163
Symbol
Os09g0420300
Name
(RAP-DB) Methyladenine glycosylase domain containing protein.
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Os09t0420300-01 (Os09g0420300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os09t0420300-01 (Os09g0420300)
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
Os09t0420300-01 (Os09g0420300)
DNA repair and recombination proteins [BR:
dosa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Os09t0420300-01 (Os09g0420300)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
RAP-DB:
Os09t0420300-01
LinkDB
All DBs
Position
chr09:complement(join(15138689..15139223,15136633..15136690,15136455..15136538,15136207..15136348,15135557..15135973))
AA seq
411 aa
AA seq
DB search
MSSPVASSRVAAGAGAARRSSPSPGPRPAAGSSVVRDKDATTMMRRRLYQQQHPPSSSGA
REPGVPSMLLRRAAGGGGGGPRSLNVSCASEASNDSFCSRASTGRIGRRPVGPPGVGAAH
ALRRAAGSAGPPAARPVARKAAASVAPDVAASLIAVANGEAAPALTGPPRCPWVTPNTDP
CYAAFHDHEWGVPVHDDKKLFEMLVLSGALAEMTWPAILSKRETFKEVFMDFDPLLVAKL
SERKILGPCSPARSLLSEHRLRIIIENAQEVLKVIEEFGSFDNYCWGFLNSKPMVGRFRH
PREVPMKTPKADAMSQDLLRRGFLGVGPTVIYAFMQAVGMANDHLVTCYRFGECCSCSSS
TEAPAAAAMDGADNHSKSMVKDQEVNMICGLVECVSLEPSRARATTVLSIS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccggtggcgtcgtccagggtggccgccggcgccggcgccgcgcggaggtcg
tccccgtctcctggcccgaggccggctgctggaagcagcgtcgtcagggacaaggacgct
actaccatgatgaggaggaggctgtaccagcagcagcacccgccgtcgtcgtccggcgca
agggagccgggggtgccgtccatgctgctgcgccgtgcggcgggcggcggcggcggcggg
ccgcggtcgctgaacgtgtcgtgcgcgtcggaggcgtcaaacgactcgttctgcagccgg
gcgtccaccggcaggatcgggcgccggccggtgggcccgcccggcgtcggcgccgcgcac
gccctgcggagggcggccgggtcggcggggccgcccgccgctcgcccggtggcccggaag
gcggcggccagcgttgcgccggacgtcgcggcgtcgctgatcgccgtggcgaacggcgag
gccgcgccggcgttgacggggccgccgaggtgcccctgggtcactcctaacactgatcca
tgctatgctgccttccatgaccatgaatggggagtcccggtgcatgatgacaagaaattg
tttgagatgctagtcctgtctggtgcattggctgaaatgacatggcctgcaattctcagc
aagagggaaacattcaaggaggttttcatggactttgatcctctattggtagcaaagcta
agtgagaggaaaattctggggccatgcagccctgcaaggtctctcctgtcagagcatagg
ctgcgtataatcattgaaaatgcacaggaggtcctaaaggtcatagaggagtttggatca
tttgacaactactgctggggcttcctgaacagcaagccgatggttggcagattccggcac
ccgcgggaggtgccgatgaagacgccgaaggccgacgccatgagccaggacctgctccgg
cgaggcttcctcggcgtcgggccgacggtgatctacgccttcatgcaggccgtcggcatg
gccaatgaccacctcgtcacctgctaccgcttcggcgagtgctgcagctgcagcagcagc
actgaagctcctgccgccgccgccatggatggcgctgacaatcacagcaagagcatggtg
aaagatcaggaggtgaacatgatctgtggattggtcgagtgcgtcagcttggagccgtcg
agagctagagccaccaccgtgctcagcatctcctag
DBGET
integrated database retrieval system
