Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0238000-00
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Entry
Os12t0238000-00 CDS
T02163
Symbol
Os12g0238000
Name
(RAP-DB) SANT domain, DNA binding domain containing protein.
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
MTBP_C
Motif
Other DBs
RAP-DB:
Os12t0238000-00
LinkDB
All DBs
Position
chr12:complement(join(7619840..7619970,7619705..7619759,7619082..7619139,7617994..7618088,7617805..7617908,7617302..7617430,7614915..7616703,7614176..7614352))
AA seq
845 aa
AA seq
DB search
MSSVMMTSDNGKAPEKGGEASGPSSAPQEGEISNEPQRRRPLSGRTTGPTRRSTKGNWTP
EEDSILSRAVQTYKGKNWKKIAECFPDRTDVQCLHRWQKVLNPELVKGPWSKEEDDIIVQ
MVNKLGPKKWSTIAQALPGRIGKQCRERWHNHLNPGINKEAWTQEEEITLIHAHRMYGNK
WAELTKFLPGRTDNAIKNHWNSSVKKKVDSYMSSGLLTQVSCLPLNEYSAHCNSSPALTQ
QNSEDSGSYAVREVENSSVCSQSSLAKVSCSQVHNANVALGCDLQVNANVDNNEAHDSQS
SVGHEACYTSVGAVATAIPEVHYHVSSSNFDPDQHLQEEFAQGLNLHMSMDEVPSNSSFA
DNPTICSIENHERSLEPYDVAMEMPLSMLPSDSGAEQKLHFMSEADFNSPNCLKSELWQD
ISLQSLLSGPDAVETDSFSRSNHQSDVYSSQADNEFLAPPYLLQTSNSSSVMEATYGQSP
QMSVPPSLICSNVMTDVPSDNRSEPKEMTVSQAEMVTQSSSSSGDAEMSANPGSSNGSDI
PSMMERIPECADQHVTNAEEPEASIEKEPSVTPSATADEKQDEGALFYEPPRFPSMDVPF
VSCDLVTSGDLQEYSPLGIRQLMRSTMNVCTPMRLWGSPTHDESPDILLKSAAKSFICTP
SILKKRHRDLVSPIPDKRIEKKSGTEKDCGVSDTSSIGIQTCFINATKDDAVITKSVLRI
ERSASSKPLEKKLEFSDENKENLDNTIEQAKDGQSAGNYKHIDEQARGERRTATNITTTY
DDLPGNLQPAGILIEHNGDDLVSPDYGKNTMNRSKTQIWNLCQSVRRECLLKSLRNLLWR
NLQHA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtcatgatgacaagcgacaacggaaaggctccagagaagggtggagaagct
tctggaccttcatcagctccccaagaaggtgaaatcagcaatgaaccacaaaggcgccgg
ccgctcagtgggaggaccactggtccaacacggcgttccacgaaaggaaattggacccct
gaagaggattccatattgtccagagctgttcagacatataaagggaagaattggaaaaaa
atagcggaatgttttccggatagaaccgatgtacaatgcttgcacaggtggcaaaaggtt
ctaaaccctgaattggtcaaagggccatggtccaaagaagaagatgacatcattgttcag
atggtaaacaaacttggaccaaagaaatggtcaaccattgctcaagctttgcctggacgt
ataggaaagcaatgtcgggaacggtggcacaaccatcttaaccctggcataaacaaggag
gcatggacacaagaagaggaaattaccctcatacatgctcatcgaatgtatggaaataaa
tgggctgagctgacaaaatttttaccaggaaggacggacaatgcaattaaaaatcactgg
aacagttcagtaaagaagaaagtcgactcatacatgtcatcaggtttacttacccaagtc
tcgtgtctccctctaaatgaatactctgcacactgtaattcctcacctgcgttgacccaa
caaaacagcgaagacagtggtagctatgctgttcgagaggttgaaaattcatcagtgtgt
agtcaatcatcacttgccaaggtttcttgctcccaagtgcacaatgctaatgtggcattg
ggctgtgatttgcaagtaaatgcgaatgttgacaataatgaagcgcatgattctcaatct
tctgtgggtcacgaagcatgctatacttctgtgggggctgttgcaactgctatacctgag
gtgcactaccacgtttcttcctctaacttcgatccagatcaacacttgcaagaggagttt
gctcaaggattgaatttgcatatgagtatggatgaagtgccaagtaattctagttttgca
gacaacccaactatctgtagtatagaaaatcatgaaaggtcattggaaccatatgatgta
gcaatggagatgcctctctctatgttaccaagtgattctggagctgagcaaaaactacat
tttatgtcggaggctgacttcaatagtcctaattgtctgaaatctgaactttggcaggat
atttccttgcaaagccttctttctggacctgatgcagttgaaactgattctttttcaaga
tcaaatcatcaatcggatgtatattcctctcaagcagataatgaatttttagcaccaccc
tacctattacagacatcaaattcttccagtgtgatggaggctacttatggacagagtcca
cagatgtcagtaccaccatctcttatctgttcaaatgttatgactgatgtaccttctgat
aatagatcagaaccaaaagaaatgacagtttctcaggcagaaatggtcacacaatcttcc
agttcttcaggtgacgctgaaatgtctgctaaccctggtagtagtaatggcagtgatatt
ccttcaatgatggaaaggatacctgaatgtgcggaccaacatgttactaatgcggaagaa
cctgaagccagtatagagaaagaaccatcggttacaccgagtgctacagcagatgaaaag
caggatgagggagccctattctatgaacctcctcgttttccaagcatggatgttccattt
gtcagttgcgaccttgtaacttctggtgatctccaagagtatagtccccttggtattcgg
cagttaatgcggtcgaccatgaatgtctgcactccaatgagattgtggggctcccctaca
catgatgaaagccctgacattttgctgaagagtgctgccaaaagcttcatatgcacacca
tcaatactaaagaaacgtcacagagacctcgtgtctcctattccggataaaagaatcgag
aagaaatctgggactgaaaaggattgtggggtatcagacacatcctccatcggcattcaa
acatgttttattaatgccactaaagatgatgctgttataactaaatcagttttgcgtatt
gagcgatctgcttcttctaaacctctggaaaagaaacttgagttctctgatgagaacaag
gaaaatttggacaacacaattgaacaggcaaaagatggacagagtgcaggaaattacaaa
cacattgacgagcaggcaaggggggaacggcgtactgcaacaaatataactactacttat
gatgatctgccaggcaatttacaacctgcaggtattcttattgagcacaacggtgatgat
cttgtttccccagattatggtaaaaacaccatgaacagaagcaaaacacaaatatggaat
ctttgtcagtctgtaaggagggagtgtctgctaaaaagcctgcggaacttattgtggaga
aatcttcagcatgcataa
DBGET
integrated database retrieval system
