KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0605800-01
Entry
Os12t0605800-01   CDS       T02163                                 
Symbol
Os12g0605800
Name
(RAP-DB) Similar to 3-methylcrotonyl CoA carboxylase biotin-containing subunit (Fragment).
  KO
K01968  3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00280  Valine, leucine and isoleucine degradation
dosa01100  Metabolic pathways
Module
dosa_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Os12t0605800-01 (Os12g0605800)
Enzymes [BR:dosa01000]
 6. Ligases
  6.4  Forming carbon-carbon bonds
   6.4.1  Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
    6.4.1.4  methylcrotonoyl-CoA carboxylase
     Os12t0605800-01 (Os12g0605800)
SSDB
Motif
Pfam: CPSase_L_D2 MCCA_BT Biotin_carb_N Biotin_carb_C Biotin_lipoyl Dala_Dala_lig_C ATPgrasp_ST Biotin_lipoyl_2 ATP-grasp_3 ATP-grasp_4
Other DBs
RAP-DB: Os12t0605800-01
LinkDB
Position
chr12:join(25576599..25576937,25577421..25577542,25577642..25577789,25578080..25578217,25578328..25578423,25578505..25578564,25578699..25578791,25579200..25579311,25579555..25579659,25579738..25579874,25580211..25580436,25580518..25580681,25580807..25580923,25581021..25581263,25581358..25581453,25581669..25581686)
AA seq 737 aa
MASRLLLLPRRRSRHGGASLLLARLLSSSSSEAGGGGAVEKVLVANRGEIACRVMRTARR
LGIPTVAVYSDADRGALHVRAADEAVRLGPPPARESYLNASAIVDAALRTGAKAIHPGYG
FLSESADFAQLCKAEGLTFIGPPPSAIRDMGDKSASKRIMGAAGVPLVPGYHGAEQDIEL
LKLEANKIGYPVLIKPTHGGGGKGMRIVQRPEDFVDSVLSAQREAAASFGINTLLVEKYI
TQPRHIEVQIFGDQHGNVIHLYERDCSLQRRHQKIIEEAPAPNVTAQFRSHIGEAAVSAA
KAVGYYSAGTVEFIVDTLSGEFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRIANGECLP
LSQEQVPLNGHAFEARIYAENVPRGFLPATGTLHHYRPVPSTATVRVETGVEEGDTVSMH
YDPMIAKLVVWGESRNAALVKLKNSLSNFQIAGLPTNVGFLQELAGHSAFEKGLVDTHFI
ERYQNDLLSTSTQALSGSHEAEELGAILAAACICKKDHVSSEVSLHDKKLSMWYAHPPFR
MHHFAKRLMEFELDRELGGSSDDLLKLSVTYRSDGTYFVETEDGSSPGLDVKVDSRGDHD
FRVDVGGLQTDVTLAFYSKDNCNHIHIWHGKHHHHYRQTLRAEQSPDDSSQPSASSEARS
HPKGSVLAPMAGLVVKVLLKDGARVEEGQPVMVMEAMKMEHVVKAPCAGYVEGLKATAGQ
QVFDSSVLFTVKENKPN
NT seq 2214 nt   +upstreamnt  +downstreamnt
atggcctcccgcctcctcctcctcccccgccgccgcagccgccatggcggcgccagcctc
ctcctcgcgcggctcctctcctcatcctcctccgaggctggcggtggtggggcggtggag
aaggtgcttgtggcgaacaggggggagatcgcgtgcagggtgatgaggacggcgcggagg
ctcgggatccccaccgtcgcggtctacagcgacgccgaccggggggccctccacgtgcgc
gccgccgacgaggccgtccgcctcggcccgccgcccgccagggagagctacctcaacgcc
tccgccatcgtcgacgccgcgctccgcaccggcgccaaggctatccacccaggatatggt
tttctttcggagagcgcagatttcgcgcagctctgtaaagccgaggggcttacattcatt
ggaccaccaccatctgctatccgagacatgggcgacaagagtgcttctaagaggatcatg
ggtgctgctggtgtaccgctcgtcccaggttaccatggggctgaacaagacattgagctg
ttaaaacttgaagccaataagattgggtatccagttttgatcaagcccacacatggtgga
gggggcaaggggatgagaatagttcaaaggcctgaggactttgtggattctgtattgagt
gctcaacgagaagccgcagcatcatttggcataaacacgctgctggttgagaagtatatt
acccaacccagacatatagaagtccagatatttggagatcaacatggaaatgtgattcac
ctttatgagagagattgtagtctacaaagaaggcaccaaaagattatcgaggaagctcca
gctccaaatgtgacagctcagtttcggtctcatattggtgaagctgctgtatcagctgca
aaggcagttggttactacagtgctggaacagtggagtttatcgtggatactctttccgga
gaattctatttcatggaaatgaatactcggctccaggttgaacacccagtgaccgagatg
atcgttggccaagatcttgttgagtggcaaatacgaattgcaaatggagagtgcctacca
ttatctcaggagcaggttccgttaaatggacatgcgtttgaagcccgaatatacgcagaa
aatgtgccaaggggatttcttcctgctacaggaaccttacaccactacaggccagttccc
tctaccgcaacagtaagagttgaaactggagttgaagaaggagatactgtcagcatgcat
tatgatcccatgatagccaaacttgtggtttggggtgaaagtcgcaatgctgcgctagtc
aagctaaagaacagcctgtcaaactttcagattgcaggtttgccgaccaatgttggtttc
ctccaagaactcgcaggtcatagtgcctttgaaaaaggcctagtcgatacacatttcatt
gaacgctatcaaaatgatcttctgagtacttctactcaagccttgagtggatcacatgaa
gcagaagagcttggtgcaattttggctgctgcctgcatttgcaagaaggatcatgtttcc
tctgaagtgtcacttcatgataagaaactttctatgtggtacgcccatccacctttcagg
atgcatcattttgccaagcgtctaatggaatttgagttggatagagaacttggtggatca
agtgatgatcttcttaaactgtcggtaacatatagatctgacggaacctacttcgttgag
actgaagatggttcttctcctggattggatgtcaaagtagatagcagaggtgaccatgat
ttccgggttgatgttggtgggctgcaaacagacgtaactctagcattttattcaaaggac
aattgcaaccatatacacatctggcatgggaagcatcatcatcattacaggcagacgttg
agagctgagcagtcacctgatgacagttctcaacctagcgcttcctctgaggcgaggtca
catccaaaggggagtgttttggcaccaatggctggtctggttgtaaaggttttgcttaaa
gacggggcacgggtggaggaaggtcagcctgtcatggttatggaagcaatgaagatggag
catgttgtgaaggcgccttgtgccggatatgtggaagggctgaaggctactgccggacaa
caagtttttgactctagtgtccttttcaccgtgaaggagaacaagccaaattga

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