Dendroctonus ponderosae (mountain pine beetle): 109538948
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Entry
109538948 CDS
T04899
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109538948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpa03041
]
109538948
Enzymes [BR:
dpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109538948
Spliceosome [BR:
dpa03041
]
Complex A
U2 snRNP components
U2 related factors
109538948
Complex B
109538948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Ribosomal_L12_N
Motif
Other DBs
NCBI-GeneID:
109538948
NCBI-ProteinID:
XP_019761953
EnsemblRapid:
LOC109538948
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MVRSPERRSRRSRSRSKERSTKSSRRRSRSRDRDRRRSRSKDKVTSERNRSRDRGRNRSQ
SRDRFRRDRDRSKSRDRDRDRGRDHRDRRAGSKDRKKRKNSRSRTPEKKDDSGLSFDPAN
LDKEEEQKKLELEMQKRRERIERWRAERKKKEQDSVKKESKSDSSNSSQGAIKKWSLEDD
SEDEDKMDDKSEVKKEEETVKEENGKVEEVEKKEEPEEKPTIDTEKMEEDDEEEDDDDVD
PLDAFMQGVQEEVRNINKIHVKKGNKNGSSKKGSLVIVTGVAKKKVDKNKGELIEQNQDG
LEYSSEEEAEDLKDTAANIANKQRKDLARIDHNNITYVSFRKNFYVEVPEIGKMTNVEVD
AYKEELEGIRVKGKGCPKPIKTWAQCGVSTKELNVLKRMGFDKPTPIQTQAIPAIMSGRD
LIGIAKTGSGKTLAFLLPMFRHILDQPPLEETDGPIAIIMTPTRELCMQIGKDIKKFTKS
LNLYAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGKVTNLRRVTYIVLDEA
DRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILMKPIEVQVGGRSVVCQ
EVEQHVVVLEEEQKFLKLLELLGLFQEQGSIIIFVDKQENADILLKELMRASYNCMSLHG
GIDQFDRDSTIVDFKSGKIKLLVATSVAARGLDVKQLILVVNYDCPNHYEDYVHRCGRTG
RAGNKGFAYTFITPEQGRYAGDIIWALELATLHVPETLRKLWDDYKSKLESEGKRVHTGG
GFSGKGFKFDENEAAAVNERKKFQKAALGLQDSDDEDLEQDIDQQIESMFATKRTVKEIK
APLGISPAAAAAAAQASANSSGSAVNKLELAKKLASKITFTKSTNFDAKFATQQAAESIL
KGSSSALPITAKTVAEQLAAKLNNKLNYQPKDDEDRMDEDTEQTFRKYEEELEINDFPQQ
ARWRVTSKEALAQISEYSEAGITVRGTYVPTGKAPPEGERKLYLAIESTSDMAVSKAKSE
ITRLIKEELLKLQTSGHHMINKNRYKVI
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggttagaagcccagagcgaagatctcgccgatctagatccagaagtaaagaacggtcc
actaaaagtagtcgtagaaggagcaggtctcgagatcgggacaggcgaagaagtcgctca
aaagataaggttaccagtgagagaaataggtcaagagacaggggaagaaacaggagccag
tctcgggatagattcaggcgagatcgggatagaagtaaatctagagatagggatagagac
aggggcagggatcatagagatagaagagctggaagtaaagacaggaaaaaaagaaaaaac
tctagatcgcgaacaccagaaaaaaaagatgattcggggttgtcgtttgatcctgcaaac
ttggataaggaagaagagcaaaaaaaactggaattagagatgcaaaagcggcgagaacga
atagagcgatggagggctgaaagaaaaaaaaaagagcaggactctgtgaagaaggaatct
aaatcggattcctcaaattcatcacaaggagcaataaagaaatggtctttagaagatgat
tctgaagatgaggataaaatggatgataagtcggaggtgaaaaaagaggaagaaaccgtc
aaggaagaaaatggaaaagtcgaggaggttgagaagaaagaggagccagaagagaaaccc
acaattgacactgaaaaaatggaagaagatgatgaagaagaggatgacgatgacgtcgat
cctctggacgcatttatgcaaggtgtacaagaggaagtaagaaacattaataaaatccat
gtgaaaaagggcaataaaaatgggtcttccaaaaaagggtcacttgtaattgtgactggg
gtggcaaagaaaaaggtagacaaaaataaaggagaacttattgagcaaaatcaagatgga
ttggaatattcttcagaggaagaagcagaagatttgaaagatacagcagcgaatatagca
aataaacaaaggaaagatttagctcgaatagaccacaataatattacatatgtttcattt
aggaagaatttctatgtagaagttccagaaataggcaaaatgactaatgtagaggtagat
gcatataaggaagaattagaaggaattagagtcaaaggtaaaggatgcccaaagccaata
aaaacatgggcgcaatgtggagtttcaactaaagagctcaatgttttaaagaggatgggc
ttcgacaagcctacgccaattcaaacacaagcgattcccgctataatgtctggaagagat
cttatcggcatagcgaaaactggaagcggcaaaactctagctttcctgttaccgatgttt
cgacatatactcgatcagcctccactggaggaaaccgatgggcctatcgcaataatcatg
actcccactcgggagttgtgcatgcaaataggcaaagatatcaagaagtttacaaaaagt
ttaaatttatatgcagtgtgcgtgtatggaggtacgggaatatccgagcaaattgcagaa
ttgaagcgaggtgccgagattatagtctgtacccctggccgcatgatcgatatgttggca
gcaaatagtggaaaagttacaaatttaagacgagttacttacatagttttggatgaagct
gatagaatgtttgatatgggatttgaaccgcaggtaatgagaatcatagacaatgtgcgc
ccagataggcaaactgttatgtttagtgcaacttttccaaggcaaatggaagctctggca
cgcaggattttaatgaaacctatcgaggttcaagtgggagggcgatcagttgtttgtcaa
gaggttgagcaacacgtagttgtattagaagaagagcaaaaattcttgaaacttttggag
cttttaggactttttcaagagcaaggaagtattattatttttgtggataagcaagaaaat
gcggatattttgctgaaagaattaatgagggcatcatataattgcatgagcttacacgga
ggtatagatcagtttgatagggattccacgattgttgacttcaagtctggaaaaataaaa
ttattagtggccacttcggtagctgcaagaggtcttgatgtgaaacaactaattttggtt
gttaattacgattgcccaaaccattatgaagattatgtgcatagatgtggaagaacgggg
agggctggaaataaagggttcgcctacacttttattactcctgaacagggcagatatgcg
ggcgatataatttgggcccttgagttagcaactctccatgtgcctgaaaccttgaggaag
ttgtgggatgattacaaatcgaaattagaatcagaaggaaaaagagtgcatactgggggt
ggttttagcggcaaaggttttaagtttgacgagaacgaagctgcagctgtaaatgagcgg
aaaaagttccagaaggctgctttaggtttgcaagacagcgacgatgaagacttggaacag
gacattgaccagcaaattgaaagcatgtttgcaaccaaacgaactgtaaaagaaattaag
gctcctctcggaattagcccagcagctgcagctgctgccgcccaagcgtcggcgaattct
agcgggtcagctgttaataaactggaattggctaagaagcttgcgtcgaaaatcacgttt
acgaaaagtacaaattttgatgccaaattcgctacgcaacaagccgctgagtctattctc
aaaggtagcagttctgcacttccaataacagcaaagacggtggctgagcagctagcggcg
aaactgaacaacaaattgaactaccagcccaaagacgatgaagatcgtatggacgaagac
accgaacagacgtttagaaagtatgaagaagagttggaaattaatgacttcccacaacaa
gccagatggagagttacatcaaaggaggcattagcacaaatttctgaatattcagaagcc
ggtatcaccgtgagaggtacttatgttccgactggaaaagcacccccagaaggggagcgc
aagttatatcttgcaattgaaagtacttcagatatggcagtttccaaagccaaatcggag
atcaccagattaatcaaggaggaattgctcaagctgcagacgtccgggcaccacatgatt
aacaaaaatagatacaaagtaatttaa
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integrated database retrieval system
