KEGG   Dendroctonus ponderosae (mountain pine beetle): 109541402
Entry
109541402         CDS       T04899                                 
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dpa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109541402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dpa03400]
    109541402
Enzymes [BR:dpa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     109541402
DNA repair and recombination proteins [BR:dpa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     109541402
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C LIG3_BRCT BRCT_2 RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 109541402
NCBI-ProteinID: XP_048526231
EnsemblRapid: LOC109541402
LinkDB
Position
Unknown
AA seq 946 aa
MKYSELAAQLKLFLSQFRLHISLSCFADISRKMSDNEQEERIFELELAKNGRAGCKKCKQ
KCLQGVLRIAKITANPFGEGKMKNWHHINCLFEIFKKQRSTTKRIENEDDIIGFNAISSD
EQNSIRDQIQQLNQFFGVPKKTHSKKVTQASSKAASSKSVLSGVNVVSDSTTDDLFKTFQ
KIVKEVANHPSYLDKTRIIKNFFEKGTSGEGFKGDVEVWCRLLLPASVKRIYNLQSRQLV
KVFSRIFLEDHEEMLEHLEQGDIGGTISHFYQKSQKYSPLPTGSTFTVQKVDAFLEKLSK
LTKEEDQIGHFSNILKHLTADDLKTIIRLIKHDLRMGAGAKHILEGIHPDAYSVYKASKD
LDGVVERCFGNKKVQSAEIKILTPVFPMLAEACKSVEHAMKKCPNGMFSEIKYDGERVQV
HKHGNEFKYFSRSLKPVMPHKVAHFKEYIPKAFPHAKDLILDTEILMMDTKTGKPLPFGT
LGVHKKAQFQDANVCLFVFDCIYYNGESLMQKPLKERKNILHTTMKEVPNRIVFSEMQEI
DEPGKLAKMIAKVLKLGLEGLVLKDTMSIYEPGKRLWLKVKKDYLFDGAMADSADLIVLG
AWYGSGQKGGMMSVFLMGCYNTETKAFCTVTKVHTGHDDKTLERLQSELKMEKISGNPGK
VPRWLNCTRTMVPDFVARDPKKQPVWEITGAEFTQQHDVHTADGISIRFPRVTKIRTDKT
WETATNVAELKTLFKNSKENTDVSLLLKEYNDETCTDDHSISSENVDTTNSSPKKRKLLD
ESCGASGSVAASSNSPKKIKEEPHAIDKLKQKNAHSKQIPKTTKTKEEFDGTIVKLEKPL
PILFEAIKALFINSDHPEIERYFFAYGGEILKPEKAEEATHIFHSSNKIKEVNEMWPKNS
KHLQIKWVVDCVNNQNLVPMESYMVKWKPTYNNIQAMKHNELFHRL
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgaaatattccgagctcgcagcacaattaaaattatttttaagccagtttaggcttcat
atttcacttagttgttttgcagatatctcacgaaaaatgtctgataatgaacaagaagaa
agaatatttgaacttgaattggcgaaaaatggtagagccggctgcaagaagtgcaaacag
aaatgcctgcaaggtgtcttgagaattgccaaaataactgcaaacccctttggcgaggga
aagatgaaaaattggcaccacataaattgccttttcgaaattttcaagaagcagaggtct
actacaaagcgcatagaaaatgaagatgacatcattggattcaatgccatctcctctgat
gagcagaattccattcgagaccagatacagcagctaaatcaatttttcggagtgcccaaa
aaaacgcattcaaaaaaggttacacaggcttcctcgaaggcagcctctagtaagtcagta
ttaagtggcgttaatgttgtgagtgattcaacaacagatgatttatttaaaacttttcaa
aaaattgtcaaggaagtcgcgaatcatccgagctatttagacaaaactagaattataaaa
aacttttttgagaaaggtaccagtggtgaaggattcaaaggggatgtagaagtgtggtgc
agacttctgcttccagccagtgttaaacggatctacaatctacagagcaggcagcttgtt
aaagtctttagcaggatatttctggaagaccatgaagaaatgttggagcatctggaacag
ggcgacattggtgggaccataagtcatttttaccagaaaagccaaaaatacagtccatta
cctacagggtctacatttactgttcaaaaagtggatgcttttttggaaaagctctcgaaa
ctaaccaaagaagaagatcagatcggacatttttcaaatattctgaaacatttgactgcg
gatgatctgaaaacgataatcagattaatcaagcacgatttgaggatgggagctggtgca
aagcacattttggaaggaatccatccagatgcatatagcgtttataaggcgtcgaaagac
ttggatggtgtggtagaaagatgtttcggaaataaaaaagtccagagtgcagagatcaaa
attttaacaccagtatttccaatgttggcagaggcttgcaaatctgtggaacatgccatg
aagaaatgtcctaatggaatgttttcggagattaaatatgacggcgaaagagttcaggtt
cacaaacatggcaacgagttcaaatatttttcacggtctctcaaaccagtaatgccgcac
aaagtagcccattttaaagaatacattccaaaagcgtttccacatgccaaagatctgatt
ttagacacggaaattctaatgatggataccaagactggaaaacctctaccctttggaacg
ttgggggtgcacaaaaaagcccaatttcaagatgcaaatgtttgcctttttgtttttgat
tgtatttattataatggggaaagtctgatgcagaagcccttgaaggaacgtaaaaacatc
ctgcatacaacgatgaaagaagtgcctaatcgaatcgttttctctgaaatgcaagaaatt
gatgaacctggaaaactggctaagatgatcgccaaagttttgaaattgggtttagagggt
ttggttttaaaagacacaatgagtatttacgaacccggaaaacgcctttggctcaaagtg
aaaaaagattatttgtttgatggagccatggcggacagtgcggatttgatagtgctaggt
gcttggtacggtagtggacaaaaaggaggtatgatgtctgtgtttctcatgggatgttac
aacaccgaaacaaaagcgttttgtacggtcactaaagtgcacacaggtcatgatgataaa
acattagagcgactgcaaagcgagctcaagatggaaaaaataagcggcaatcctggtaaa
gtgccaagatggcttaattgtaccagaactatggtgccggattttgttgctcgagatccc
aaaaaacaaccagtttgggaaattactggtgctgaatttacacaacaacatgacgttcat
acggctgatggcatttcgattcggttccctcgagtaacaaaaatacgaaccgataaaacg
tgggagacggcaacgaatgtagcagagttaaaaactttgtttaaaaactccaaagaaaac
accgacgtcagtcttcttttgaaagaatataacgacgaaacctgtactgacgatcactct
atatcatctgaaaatgttgatacaactaatagttcccccaagaaacgaaagttgttggac
gaatcttgcggtgcgtcgggtagtgttgcggcttcatctaattcaccaaaaaaaattaag
gaagaaccgcatgctatcgataagttgaagcagaaaaatgcccatagcaaacaaatacca
aagacaactaagaccaaagaggagtttgatggaacaatcgtgaaattggaaaaaccttta
ccaatattatttgaagccatcaaagctctattcattaattctgaccatccggaaattgag
aggtatttttttgcttacggtggggaaattctcaaaccagagaaggcagaagaagcaact
catatatttcactctagtaataaaatcaaggaagtgaacgaaatgtggccaaaaaattct
aaacatttacaaataaaatgggtggtggattgtgtaaacaaccagaatttagtgccgatg
gaaagttatatggttaaatggaaaccgacatataataatattcaggcgatgaaacacaat
gaactatttcataggttgtag

DBGET integrated database retrieval system