Dendroctonus ponderosae (mountain pine beetle): 109541739
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Entry
109541739 CDS
T04899
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109541739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpa03009
]
109541739
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
Pre-60S particles
RNases
109541739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
109541739
NCBI-ProteinID:
XP_019766229
EnsemblRapid:
LOC109541739
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MLPTKGYFQDIECPFFNTTCGRPYCHFRHKRRPNEDVEQETQKTAVPTYKPTPKSELANI
HNSKSHIPISYVPDLAFKRERTARPVRIDKPTYKPTPLSILSSASKPDNALPENHEHTET
IKDLQETMASNIYDPLQSEINFEDLSVDFDLIDSVIKESDDEGPQAVINDNLIKLENDIE
KEQNRLNLLQSRIDNGDQHSSNGSIQAKFSSDEESVKPTKALIPQPPEDPKPPQKDKATT
IEKEVEDGKGGKKTSSRHSSKEKEKASKRREEKSHDKHGKDQKKAKHKSKRHESRKSRSK
SRDRSGKKEKKHSRNRSRHRSSKPHTKGTKTKQAEKDRPSQAEPEKDPELSDVDLNLDED
DDETMRECYKIFNEYKHEPSQPAEEVKKVDEEPSVDSIYQGKKRTAHAGAEGATCSKLPG
IAPPKPHLLPGQMLANRYKIAKLAQASNEQDNIMNEIKSIAQQNAVKRPASTLLEAARQH
KLKRLERQKAAETKQSSLVDNILNGVHKPTNQRVIVKKIAAVPNVALIEKAKQRISLVKQ
QAVHNVKTIAQTQKSGRVAHVPEYSLADIPDVLQAAKSKLPVNVRTRFLTLIADECAKLY
ASKEDAFNRALSEEFACYEKCKVLATYRNSAMLAVNRLRKELQDRESKGLGMLLTGETVA
TKQATDFEGERFYNHMKKWLLTEEELDVHGYPRESSERGRALIRNQAQTDYSSVDENQRR
CSRCGKNYMVDDDGWPLFEEECLYHPLKKRTIRREQIYLCCKSGDESGCAMCHTHVFGGL
ALHQLDGYQTTLSPESANDARSLQVYALDCEMCYTTKGLELTRVTIVDTNCKTVYESFVK
PLNPIIDYNTRFSGITKEQMDRTSTSILQVQANILHLCNSETILVGHSLESDMKALKIVH
ENIIDTSVMFPHKMGLPHKRALRGLASEYLQKIIQNDVSGHDSAEDAVTCMELIKWKLKE
DLKVKTK
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaaccaagggctatttccaggatatcgaatgcccgttctttaacacgacctgc
ggcaggccgtactgccatttcagacacaagcggaggcccaacgaagatgtcgagcaggaa
acgcagaaaacggcggttcccacgtacaagccgaccccgaagagcgagctggccaacatc
cacaacagcaaaagccacataccgatcagctacgtgccggatttggcgtttaaacgcgaa
cgaactgccaggcctgttcgcatcgataaaccgacctacaagccaaccccgctcagtatt
ctcagttcagccagcaagccggacaatgccctgccagaaaaccatgaacacaccgaaacc
atcaaggatcttcaagaaaccatggccagtaacatatacgacccattgcagtccgaaatc
aactttgaagacttatcggtcgattttgacctgattgatagtgtgatcaaggagagcgac
gacgaggggccccaagctgtcatcaacgataacctaataaagctcgaaaatgacattgaa
aaggagcagaacagattgaacttgttgcagtcgcgaattgacaatggagaccagcacagt
tcgaacggctctattcaggcgaaatttagctccgatgaggagagcgttaagcccacaaaa
gccctcatcccgcagccacccgaagacccgaagcctccgcaaaaggacaaagccaccacc
atcgagaaggaagtcgaagatggcaaaggcggcaagaaaacctcaagccgacacagttca
aaggagaaggagaaggcctcaaaacggagagaggagaagagccatgataagcacgggaaa
gaccagaagaaagcgaaacacaaaagcaaaaggcatgagagcagaaagtcgcgcagcaaa
agcagggatagatcgggaaaaaaagagaagaagcatagcagaaacaggtcgcggcatagg
agcagcaaaccccacacaaaaggaacaaagacaaagcaggctgaaaaagacagacccagt
caggctgagcctgagaaagatccggaactttcggacgtcgatctgaacttggacgaggac
gacgacgagactatgcgcgaatgctacaagatattcaatgagtacaaacatgaaccctcc
cagcctgctgaagaagtgaaaaaagtggatgaagaaccctcagttgacagtatataccag
ggcaagaaacgtacggcacacgcaggagccgaaggcgccacttgctccaaattgccgggc
attgcgccccccaagccgcatctgctccccgggcaaatgctagcgaatcgctataaaatt
gcgaagctagcgcaagccagtaacgagcaggacaatataatgaacgaaatcaagtccatt
gcccagcagaacgcggtcaagcgtccagccagcactttattagaggcggcgcgccagcac
aaactcaaacgactggaacggcaaaaagcggccgaaaccaaacagtccagcctagtggac
aacatcctgaatggagtgcataagccgacaaaccagagggtgattgtgaaaaaaatcgcc
gccgtccccaatgtggctctcatcgagaaggccaagcaacggatctcgctggtcaagcaa
caagccgtccacaacgtcaaaaccattgcccagacgcaaaagagcgggcgggtcgcccac
gtgcccgagtactccttggctgacattccggatgttctacaggcggccaagtccaaactt
cccgtgaatgtgaggacacgcttcctcaccctcattgctgacgagtgcgccaaactgtac
gcctccaaagaggacgccttcaacagggctttgagcgaggagtttgcctgctatgaaaag
tgcaaagttttagccacctataggaactcagcaatgctggcagttaataggctgcgaaag
gaacttcaagaccgcgagagtaaagggctgggaatgctgctaacgggggaaactgtggcc
actaagcaagcgactgactttgagggcgaacgcttctacaaccacatgaagaagtggctg
ctgacggaagaagagctcgatgttcacgggtatccgcgtgaaagcagcgaaagaggcaga
gccctcatacgcaaccaggcgcaaaccgactattcgagcgtggatgagaatcagcgaaga
tgcagcagatgcggcaaaaactacatggtggacgacgacggttggccgctgtttgaggag
gaatgcctgtatcatccgctgaaaaagcgcaccatccgcagagagcagatctacctgtgt
tgcaagagcggcgatgagagcggttgcgccatgtgccacacgcacgtgtttggtggactg
gcgctgcatcaactggatggctaccaaacaactttgtcgccagaatcggcaaacgatgcc
cgcagtctccaggtctacgccctcgactgcgaaatgtgctacacgaccaaaggcctggaa
ctgaccagagtgaccatcgtggacacgaactgcaaaaccgtctacgaaagctttgtgaag
ccactcaacccgatcatcgactacaacacgcgcttctcgggcatcaccaaggagcagatg
gaccgaactagcaccagcattctgcaggttcaggccaatattctgcacctgtgcaactcg
gagaccattctagtgggccacagtttggagagcgacatgaaggcgctgaagatcgtccac
gagaacattatcgacacgtcggtgatgtttccccataaaatggggttgccccacaaaagg
gcgctacggggcttggcgagcgaatacttgcaaaagatcattcagaacgacgtgtccgga
catgacagtgccgaggacgcggtcacttgcatggaactgatcaagtggaaactgaaggag
gacctcaaagtgaaaaccaagtga
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