Dendroctonus ponderosae (mountain pine beetle): 109543938
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Entry
109543938 CDS
T04899
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpa03009
]
109543938
Enzymes [BR:
dpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109543938
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
90S particles
Helicases
109543938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
109543938
NCBI-ProteinID:
XP_019769436
EnsemblRapid:
LOC109543938
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MENEGKGPKNHRRKKPVKAFTKKKKTGQPESVLIENLKSQYDTIDVSKVEKFVDLPLSHK
SIKGLKESKYTKLTDIQKASVPLALQGKDILGAAQTGSGKTLAFLLPVLERLYCEQWSRV
DGIGALVITPTRELAYQIFEALKKVGKYHDFSAGLIIGGKDLKFERKRMDQCNIVICTPG
RLLQHMDENPLFDCVTMKILVLDEADRCLDMGFQETMNAIIANLPPMRQTLLFSATQTKS
VKDLARLSLKDPSYVSVNEMTTPKGLEQSYVICELQDKLQILWSFIKNHLKQKTIIFFST
CKQVKFFYEIICKLRPGLSLLPLYGTLHQLRRMKIYEEFCRKQSAILFATDLAARGLDFP
EVHWVVQADCPEDVETYIHRVGRTARYYKGGESLLLLLPSELKMVERLEEKKIPVEKIEI
NMTKVQNPVRKLEAFLAMDTTLKDTAQRAVSHYARAVFFMKNKDVFNVQSLDFDAFSKSL
GLAVPPRIRFLSRMNKKLQQGADSAVANKLESLVSGSKNKTYFDNCDDDQEQPAETKEAQ
KSIKQKSKESESEPEEGYQSDESDTNIASFKFDGGKGANRGLGGNFFTSDSEDDDSNMLQ
LKRVDHDIETPSGIGNFEPGSERTSKKKTITKAAVVKKIIKKKIVANTKITFDEEGKSAV
VHGTKEKKSDLGREYEKEDAGGIDIEKAKLVLREEDKFDKQVFKDKVKAKHREEKKRLKA
LKQQEQEGERDEFGESDEDEGPDLSWLPDPDQVYEQPADSDEENGPESRLSSALDESEDA
KEPGSSKAKTDKRGKKRKQKGVNDLETVLKRKRKQRVEQLTADLNVNETEELALMLLRGR
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaaggcaaaggcccgaagaaccacagaaggaagaaacccgtaaaggcgttc
acaaagaaaaagaaaactgggcagcctgaaagtgttctcattgaaaacctaaagtcccag
tacgacacgatcgacgtgagtaaagtggagaaattcgtggacttgcccctgagccataaa
agcatcaagggcctgaaagagtcaaaatacaccaagctaaccgacattcaaaaggccagc
gtacctttggcgttgcaaggtaaagatattctgggggctgcccagacaggctcaggcaaa
accttggcctttctactgcctgttttggagcgcttatattgcgaacaatggtccagagtg
gatggcattggcgctcttgttatcacccctaccagagagttggcttatcagatatttgag
gctctgaagaaagttgggaagtaccacgacttctcagctggtttgatcattgggggcaaa
gacctgaagttcgagaggaagaggatggatcagtgcaacattgtcatttgcacccctggg
cgtttgctgcagcacatggacgaaaaccccctgtttgactgtgtcactatgaagattctg
gtgcttgatgaagctgatagatgcttggacatggggttccaggaaaccatgaacgccatt
attgccaatttgcctccaatgcgccaaactttgcttttttctgccacccaaaccaagtcg
gttaaagacttggccagattgagcctaaaggacccctcatacgtgagcgtaaatgagatg
accactccaaaggggctggagcaaagctatgtgatctgcgagcttcaagacaagctgcaa
atcctttggagcttcatcaaaaaccatctcaaacagaagacaatcatattcttctccacc
tgcaaacaagtcaagtttttctatgaaatcatctgcaagttgaggcctgggttgagtctc
ttgccgctttacggcactctccaccaactaaggcgcatgaaaatctacgaggaattctgc
cgaaaacagtctgcaatacttttcgccactgatttagcagccagaggcctggactttcct
gaagtgcactgggtggttcaagcagactgtcctgaggatgttgagacgtacattcataga
gtgggacgaaccgctcgatactacaaaggcggagaaagtcttctcctactgttgcccagc
gagttaaaaatggtggaacgcctggaggagaagaaaattcccgtggaaaaaatagaaatc
aacatgactaaggtgcaaaatccagttcgaaaactcgaagccttcctggctatggacacc
acattgaaagacaccgcgcagcgggctgtaagccactatgccagagcggttttcttcatg
aaaaacaaggacgttttcaacgtgcaaagtctggatttcgacgcgttttccaagagtttg
ggactggcagtgccgcccagaatccggtttctgagtaggatgaacaagaaactgcagcaa
ggcgccgatagtgcggtggccaacaagctggaaagcttggtgagtggcagcaaaaacaaa
acgtacttcgataactgcgacgacgatcaggagcaaccagctgaaaccaaggaagcccaa
aagagcatcaagcagaaatccaaggaaagtgagtctgaaccggaagagggctaccagtct
gatgaaagcgacacgaatattgcttcattcaaattcgatggaggaaaaggcgcaaaccgc
ggcctggggggcaacttttttacatcagacagcgaggatgacgacagcaatatgctacag
ctcaaaagggtggatcatgacattgaaacgccgtctggaatcggaaactttgagcccgga
tcagaacgcactagcaaaaagaaaaccatcaccaaagcagcagtagtaaagaaaattata
aaaaagaaaatcgttgccaacacgaaaattacctttgatgaagagggaaagagcgctgtg
gtgcatggaacgaaggaaaagaagtccgatttaggcagagagtatgagaaagaggatgcg
ggcggaatagacattgagaaagcgaaactggtgctgagggaagaggacaagtttgataag
caagtgttcaaggataaagttaaggccaaacacagagaggagaagaagcgcctgaaggcc
ctcaaacagcaggagcaagagggagaaagggacgagtttggagagagcgacgaggatgaa
ggccctgacttatcgtggcttcctgatcccgaccaagtgtatgagcagcctgcagattca
gacgaagaaaacggccctgaaagtagactgtcatcggcattggacgagagcgaagacgca
aaagaaccaggaagcagcaaagccaaaacggacaaaaggggcaagaagcggaagcagaaa
ggggtgaatgatctggaaacggtgctgaagcggaaaaggaagcaacgggtcgagcaacta
actgccgacctaaatgtaaacgaaacggaagagttggctttaatgctgctcagaggtaga
aagtaa
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