Dendroctonus ponderosae (mountain pine beetle): 109545068
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Entry
109545068 CDS
T04899
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03022
Basal transcription factors
dpa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109545068
09124 Replication and repair
03420 Nucleotide excision repair
109545068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpa03021
]
109545068
03400 DNA repair and recombination proteins [BR:
dpa03400
]
109545068
Transcription machinery [BR:
dpa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109545068
DNA repair and recombination proteins [BR:
dpa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109545068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
C1_2
IBR
FYVE
Motif
Other DBs
NCBI-GeneID:
109545068
NCBI-ProteinID:
XP_019771118
EnsemblRapid:
LOC109545068
UniProt:
J3JTY9
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDEDDPKEYRWETGYEKTWEAIKEDDDGFLEASVAVIILRAKRRRQAQKKGNTKLGMMRH
LFLILDCSESMSSQDLKPTRMLCSLRILEGFIEEFFDQNPISQMGIILMQNKRAEKVCEL
GGNFRKHIKYLRSMSKTSLLGEPSLQNGLEDAFSSLKLVPTHASREVLVIMGSLTTCDPT
DINTTIQKFKQEGIRCSIIGLAAEVHICRTLANETKGTYNIILDDSHYKDLLYQQVEPPP
AAVALEASLIKMGFPHQMNTEGTDEPLTICMCHVDSTEEGKLTTGGYYCPQCLSKYCELP
VECRACGLTLVSAPHLARSYHHLFPPANFEEMQFDKQVTTCYACQKTFNDGDKQVYQCPT
CKRMFCIDCDIFIHDTLHTCPGCATNLSTFQLIQS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagacgatcctaaggagtatcgttgggagacgggatatgaaaaaacttgggag
gctattaaagaagatgatgatggctttcttgaggcttctgtcgcagtcattattttacgg
gcaaaacggcgaaggcaggctcagaaaaaaggcaacaccaaacttggtatgatgagacac
ttatttcttattttggattgctctgagtcgatgtccagtcaagatctgaagcctacgcga
atgctgtgctcattacggattttggaaggtttcatagaagaattttttgaccaaaatccg
atcagccaaatgggtattatactgatgcaaaacaagagagctgaaaaagtttgcgagtta
ggaggcaacttccgaaagcacattaaatatcttagatcaatgtcaaagactagtttactg
ggagaaccatctttacaaaatggtttagaagacgcgttctcttctttaaaacttgtaccg
acacacgccagtagagaagttctcgttatcatgggaagcctaacaacttgtgatccgact
gatattaatacgactatacagaaatttaaacaggaaggaattagatgctcaataattggt
ctggcagcagaagttcatatttgcagaactttagccaatgagaccaaaggcacgtacaat
ataattttggatgatagccattataaagacttactatatcagcaagtcgaaccaccacca
gcagccgtagctctggaagcgagcttaattaaaatgggatttccacatcagatgaacact
gaaggaacggacgaaccactcacaatatgtatgtgtcatgtggatagtacagaggaaggc
aaattaaccacgggtgggtattactgccctcagtgtttaagcaagtattgcgaattgcca
gtggaatgtcgagcgtgtgggttaactttggtatctgctccacatttagcaagatcttac
catcacctatttcccccagcaaactttgaggaaatgcaattcgataaacaagtcacgact
tgttatgcctgccaaaaaacttttaatgatggtgataaacaggtttaccagtgcccgaca
tgtaagagaatgttttgtattgattgcgatattttcatacatgatacgctgcatacatgt
ccaggatgtgccactaatttatccacatttcaactgatacaaagctga
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integrated database retrieval system
