Drosophila persimilis: 6596959
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Entry
6596959 CDS
T01063
Name
(RefSeq) collagen alpha-1(I) chain
Organism
dpe
Drosophila persimilis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBM_14
Motif
Other DBs
NCBI-GeneID:
6596959
NCBI-ProteinID:
XP_026845436
LinkDB
All DBs
Position
Unknown
AA seq
1438 aa
AA seq
DB search
MTTNRSTRLLVLLVLTALVANHQARGAAAVLKCGGKSAVCVGPLTYQICVDDLTTGAVIA
CQTSTRCVTDGIEICEPIKSDAEAPTAAVAKMVTITDSPAAVSESAPLVVASNATPEVIS
TEGPGSSAPAETTTAPVETTTAPVETTTAPAETTTAPAETTTAPAETTIITETTTETAWS
ELPLDPESTISVIPEDTTTDASWDPNAPVETTLSPGSDGSNTTIDPNAPLDPNAPEGSTV
DPNAPIDPNAPLDPNAPEGTTAAPGEVNPNDPAGSTPAPGVPADPNAPLDPNAPLDPNAP
EGTTAAPGEVNPNDPAGSTPAPGAPADPNAPLDPNAPLDPNAPEGTTAAPGEVNPNDPAA
STAAPGSPADPNAPLDPNAPLDPNAPEGSTAAPGEVNPNDPAASTAAPGTPADPNAPAGS
TAAPGAPADPIAPLDPNATLDPNAPEGSTAAPGEVNPNDPAGSTPAPGVPADPNAPLDPN
APLDPNAPEGTTAAPGEVNPNDPAGSTPAPGAPADPNAPLDPNAPLDPNAPEGTTAAPGE
VNPNDPAASTAAPGSPADPNAPLDPNAPLDPNAPEGSTAAPGEVNPNDPAASTAAPGTPA
DPNAPAGSTAAPGAPADPNAPLDPNAPLDPNAPAGSTAAPGTPADPNAPAGSTAAPGAPA
DHNAPLDPNAPLDPNAPAGSTAAPGTPADPNAPLDPNAPLDPNAPVDPNAPAGSTAAPGA
PADPNAPLDPNAPLDPNAPLDPNAPAGSTAAPGTPADPNAPAGSTAAPGAPADPNAPLDP
NAPLDPNAPAGSSAAPGTPVDPNAPAGSTAAPGAPADPNAPLDPNAPLDPNAPAGSTAAP
GTPADPNAPLDPNAPLDPNAPLDPNAPVDPNAPAGSTAAPGAPADPNAPLDPNAPLDPNA
PLDPNAPASSTAAPGTPADPNAPAGSTAAPGTPADPNAPAGSTAAPGTPADPNAPAGSTA
APGTPADTNAPAVSTAAPGTPADPNAPAGSTAAPGAPADPNAPAGSTAAPGAPADPNAPA
VSTAAPGTPADPNAPAGSTAAPGTPADPNGPAGSTAAPGTPADPNAPAVSTAAPGTPADP
NAPAVSTAAPGTPADPNAPAVSTAAPGTPADPNAPAVSTAAPGTPADPNAPAGSTAAPGT
PADPNAPAVSTAAPGTPADPNAPPGSTAAPGLPFWPLGPHRPGQTDKAEGPNNGNSQPTS
PNRPLPFWPNWQNWVNSWRTTRKPVTVTQAPATSPEPASPQRPEKPSNNSPEAVESVEQA
APAPPSGGAASSENASVEESNKGSGEKPKDKPKSGEDQSKEQEQKKPNSAEKDSSREEKK
EQEKEKSKDSKEEKEEKEEKDSESKKSKDDEKNDEDKLSSKEKKKYVKNIIKKLKNEEDC
NEEDVFPDVRDCKKYYRCEVKSSSEKHKFVHLRCDKKKRFDWLEQSCVPKDEARCLEK
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaaccgatcgaccagacttctggtcttacttgtgcttacagccctagtggca
aaccaccaggcaagaggagccgccgccgtcctcaagtgcggtggcaagtcggctgtctgc
gtgggacctctcacctaccagatctgcgtggacgatctgaccacgggcgccgtcattgcc
tgccagacgagcacccgttgcgtcaccgatggcatcgagatctgcgagcccatcaagtcg
gacgcagaggcacccacggcggctgttgcgaagatggtgacgatcaccgacagtccggcc
gccgtgagtgaatctgccccgcttgtcgttgcctccaacgccacccccgaagtgatctcc
actgagggtccaggatcatctgctccagctgagacgaccacagccccagttgagacgacc
acagctccagttgagacgaccacagccccagctgagacgaccacggctccagctgagaca
accacagctcctgctgagacaaccatcatcacggaaacaaccacagaaacggcatggtcc
gagctgcccctagacccggagtccaccatatcagtcattcccgaggacactaccaccgat
gcttcctgggatcccaacgcgcctgttgagacaactctgtctcccggctctgatggaagc
aacacaacaatcgatcctaatgcaccattggaccccaatgcgcccgaaggatctactgtt
gatcctaacgcacccatcgatcccaatgctcctctggaccccaacgcaccagaagggaca
accgctgctcctggagaggtaaaccccaacgatcccgctggttcgactcctgctccagga
gtacctgctgatcccaacgcaccgctggatcccaatgctcctctggaccccaacgcacca
gaaggaacaaccgctgctcctggagaagtaaaccccaacgatcccgctggttcgactcct
gctcctggagcccctgctgatcccaacgcaccgctggatcccaatgctcccctggacccc
aacgcaccagaaggaacaaccgctgctcctggagaggtaaaccccaacgatcccgctgct
tcgactgccgctcctggatctccggctgaccccaacgcacccctggatcccaatgctcct
ctggaccccaacgcaccagaaggatcaaccgctgctcctggcgaggtaaaccccaacgat
cccgctgcttcgacagctgctcctggaactccagcggatcccaacgctcccgctggttcg
acagccgctcctggagctcctgccgatcccatcgcaccgctggatcccaatgctactctg
gaccccaacgcaccagaaggatcaaccgctgctcctggagaggtaaaccccaacgatccc
gctggttcgactcctgctccaggagtacctgctgatcccaacgcaccgctggatcccaat
gctcctctggaccccaacgcaccagaaggaacaaccgctgctcctggagaagtaaacccc
aacgatcccgctggttcgactcctgctcctggagcccctgctgatcccaacgcaccgctg
gatcctaatgctcccctggaccccaacgcaccagaaggaacaaccgctgctcctggagag
gtaaaccccaacgatcccgctgcttcgactgccgctcctggatctcctgctgaccccaac
gcacccctggatcccaatgctcctctggaccccaacgcaccagaaggatcaaccgctgct
cctggcgaggtaaaccccaacgatcccgctgcttcgacagccgctcctggaactccagcg
gatcccaacgctcccgctggttcgacagccgctcctggagctcctgccgatccaaacgca
cccctggatcccaatgctcctctagatcccaacgctcccgccggctcgacagccgctcct
ggaactccagcagatcccaacgctcccgctggttcgacagccgctcctggagctcctgcc
gatcacaacgcacccctggatcccaatgctcctctagatcccaacgctcccgccggttcg
acagccgctcctggaactccagctgatcccaacgctccactggaccctaatgctcctctg
gaccccaatgctcctgtggaccctaacgctcccgctggttcgactgccgctcctggagct
cctgccgatcccaacgcaccactggatcctaatgctcctctggaccccaatgctcctctg
gatcccaacgctcccgccggttcgacagccgctcctggaactccagcagatcccaacgct
cccgctggttcgacagccgctcctggagctcctgccgatcccaacgcacccctggatccc
aatgctcctctagatcccaacgctcccgccggttcatcagccgctcctggaactccagtg
gatcccaacgctcccgctggttcgacagccgctcctggagctcctgccgatcccaacgca
cccctggatcccaatgctcctctagatcccaacgctcccgccggttcgacagccgctcct
ggaactccagctgatcccaacgctccactggaccctaatgctccactggaccctaatgct
cctctggaccccaatgctcctgtggaccctaacgctcccgctggttcgactgccgctcct
ggagctcctgccgatcccaacgcaccactggatcctaatgctcctctggaccccaatgct
cctctggatcccaacgctcccgccagttcgacagccgctcctggaactccagctgatccc
aacgctcccgctggttcaactgccgctccgggtactcctgccgatcccaacgctcccgct
ggttcgacagctgctcctggtacccctgctgatcccaacgctcccgctggctcgacagcc
gctcctggcactcctgctgataccaacgctcccgctgtttcgactgctgctcctggtacc
cctgccgatcccaacgctcccgctggttcaactgccgctcctggtgcccctgctgatccc
aacgctcccgctggatcaactgctgctcctggtgctccagcagatcccaacgctcccgct
gtttcgactgctgctcctggtactcctgccgatcccaacgctcccgctggttcaactgcc
gctcctggtacccctgctgatcccaacggtcccgctggctcgactgccgctcctggcact
cctgctgatcccaacgctcccgctgtttcgactgctgctcctggtactcctgccgatcct
aacgctccggctgtttcgactgctgctcctggcactcctgctgatcccaacgctcccgct
gtttcgactgctgctcctggtactcctgccgatcctaacgctccggctgtttcgactgct
gctcctggtacccctgctgatcccaacgctcccgctggctcgactgccgctcctggcact
cctgctgatcccaacgctcccgctgtttcgactgctgctcctggtactcctgccgatccc
aacgctccccctggttcaactgccgctcctggtctgccgttctggccattgggcccacat
cgtccaggacaaaccgataaggctgaaggacccaacaatggcaattcccagcccacctca
cccaatcggccacttccattctggccgaactggcagaactgggtaaacagctggcgcaca
actcgtaagccagtcaccgttactcaagcccccgctaccagtccggaaccagcgagtccg
cagcgaccagagaagcccagcaacaatagccccgaagctgtcgagagcgtagagcaggct
gcccctgcacccccatcaggtggagctgcatccagcgagaacgcctctgtcgaagagagc
aacaagggatctggcgagaaaccaaaggacaagccgaagtcaggcgaagaccagtccaag
gagcaggagcagaagaagcccaactccgctgagaaggacagttcccgcgaagagaagaaa
gaacaggagaaggaaaagtcgaaagattccaaggaggaaaaggaggaaaaggaagaaaag
gacagcgagtcgaagaagtccaaggatgatgagaagaatgacgaggacaagctgagctca
aaggaaaagaagaagtacgtgaagaacatcatcaagaaactgaagaacgaggaggactgc
aacgaggaggacgtcttccctgatgtccgtgactgcaagaaatactaccgctgtgaggtg
aagagttcctctgagaagcacaagttcgtgcacctgcgctgcgacaaaaagaagcgattc
gactggctggaacagagctgtgtgcccaaggacgaggctcgctgcctggagaagtaa
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