Dyadobacter pollutisoli: ON006_06760
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Entry
ON006_06760 CDS
T09794
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ON006_06760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpf03019
]
ON006_06760
03009 Ribosome biogenesis [BR:
dpf03009
]
ON006_06760
Enzymes [BR:
dpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ON006_06760
Messenger RNA biogenesis [BR:
dpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ON006_06760
Ribosome biogenesis [BR:
dpf03009
]
Prokaryotic type
rRNA helicases
ON006_06760
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WAC13649
UniProt:
A0A9E8SMU4
LinkDB
All DBs
Position
complement(1620984..1622768)
Genome browser
AA seq
594 aa
AA seq
DB search
MTTETIENFSELGLSENIIKALTEMGFEKPSPIQAQGIPAVMQGSDVIGQAQTGTGKTAA
FGIPVLERIDTSNNAVQALILCPTRELAVQVSEELGRLGKFMRGIRIEAIYGGDSIDRQI
RSLKKGVHIVVGTPGRVMDHMERKTLKFDEVRMMVLDEADEMLDMGFREDIESILADMPE
DRQTILFSATMSKPIMSITKRFLNDPILIKVVRNELTNVNIEQVYFEVKPQAKVEVMTRL
IDMHHLKSLLVFCNTKRKVDEIVEDLQLRGYASEGIHGDLRQQQRSNVMSKFKAGVTTIL
VATDVAARGIDVSGLDGVINYDIPLDEEYYVHRIGRTGRAGLSGKAFSLVARDEKYRLKT
IEGFTKVKIEKGVIPSYEDIVGVRKARFVENISTSIKEGDDLDLFNDVLEMLHHSGFTTE
QIVGALAKQIMGVQKNEYADSNLAWEERRGERDGRREGGSGDRFERRSSGGSRFERGNDR
REGDRRGTDRYAPAGRSESRRPEGGRDESKRSATPEAGMTRLFLSLGRKDHILPKDIVGA
IAGEANIPGKTIGAIDIYDKFTFVDVPERDARAVLRAMDGNTIKGKPVQIDIAK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagaaactattgaaaatttctcagagcttggtctctctgaaaacatcattaaa
gccttaactgaaatgggttttgaaaaaccctctcctatacaggcacaaggaattccagca
gtaatgcaaggatctgacgtaattggtcaggcccaaaccggtaccggtaaaacagctgca
tttggtattcccgtgctggaaagaattgacacatctaacaacgcagtacaagcccttata
ctttgcccgacacgtgaattagcagtacaggtttctgaggaattaggccggttgggcaaa
ttcatgagaggcatcagaattgaagctatatacggaggcgactctatcgatcgccagatc
cgctctttgaaaaaaggtgtacatatcgtggtaggaactcctggtcgtgtcatggaccac
atggagcgcaagacattgaaatttgacgaagtaagaatgatggtgcttgacgaagcggat
gaaatgcttgacatgggcttccgtgaagacattgaaagcatccttgctgatatgccggaa
gaccgtcagactattcttttctcggcaacgatgtcgaaaccgattatgtcgattaccaag
cgtttccttaatgatcctatcctgatcaaagtggttcgcaacgaattgacaaacgtgaat
atcgaacaggtatactttgaagtgaagccacaggccaaagttgaagtaatgacccgtctg
attgacatgcaccatttgaaatcccttctggttttctgcaacaccaaacgcaaggtggat
gagatcgttgaagaccttcaattgagaggctatgcttcggaaggtatccatggcgacttg
cgccagcagcagcgtagcaatgtgatgagcaaattcaaagctggtgttactactatcctg
gttgcaaccgacgtagcagctcgcggtattgacgtaagcggactggatggcgtgatcaac
tacgacattcctttggatgaagaatattacgtacaccgtatcggccgtactggtcgtgca
ggtttgtcaggaaaagcattctcactggttgcccgtgacgaaaaatatcgtcttaaaacc
attgaaggctttacgaaggtaaaaattgaaaaaggagtaattccttcttacgaagatatc
gttggtgttcgtaaagcacgttttgttgaaaacatctctacatccatcaaagaaggtgat
gacctggatcttttcaatgatgtcctggaaatgttgcatcacagtggcttcactaccgag
caaattgtaggggctttggccaagcaaatcatgggcgttcagaaaaatgaatacgctgac
agcaacctggcatgggaagaaagacgcggagaacgtgatggccgtcgtgaaggtggaagt
ggagatagatttgagcgtcgttcgtcaggcggaagccgttttgaaagaggtaatgatcgc
agagaaggcgaccgtcgtggtacagaccgttatgcaccagccggaagaagcgaatcccgc
agaccagaaggtggccgtgacgaatcgaaacgtagcgctacgccggaagcaggtatgacc
cgcttgttcctgagccttggccgtaaagaccatatcttgccaaaagacatcgttggagcc
atcgctggcgaagccaacattccgggaaagaccatcggcgcaattgacatttatgacaaa
tttacattcgtagatgttcctgagcgtgatgcccgtgcggtactacgcgcaatggatggc
aacacgatcaaaggaaagcctgtccaaattgacattgccaaataa
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