KEGG   Dyadobacter pollutisoli: ON006_16645
Entry
ON006_16645       CDS       T09794                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
dpf  Dyadobacter pollutisoli
Pathway
dpf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ON006_16645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpf03019]
    ON006_16645
Enzymes [BR:dpf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     ON006_16645
Messenger RNA biogenesis [BR:dpf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ON006_16645
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: WAC15454
UniProt: A0A9E8NET6
LinkDB
Position
4063238..4064566
AA seq 442 aa
MTFEELNLTKPLLKALTEAGYTTPTTIQQKVFSVTMSGKDVCGIAQTGTGKTFAYLLPTL
RQLEFSKDRLPQLLILVPTRELVVQVVEEVRKLSAYLTLQVVGVYGGGNIKVQMAELKMG
ADVVVATPGRLVDLALNSSLKTKAIKKLVIDEVDEMLNLGFRTQLKNILDILPQKRQNLL
FSATITQEVEALMQTYFNNPVRIEAAPVGTPLDNIEQKAYEVPNFYTKVNLLDLLLEQNE
DMSKVLIFVATKKLADQLYVQLELGYLNKIGVIHSNKEQNHRFNTIRQFHDGTYRILIAT
DIIARGLDVAEVSHVFNFDIPEIPENYIHRIGRTGRADKKGVAISFITEREKEFLTLIEE
LMDYQIPITPLPETLKISEILTPDEEPKIFMKNIDVKLPKRESVGAAFHEKAAKNQKVNV
RRNHAQEKMQKYGRPIKRSGKK
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgacttttgaagaattaaatctcaccaaaccgttgctaaaagcgctgactgaggcggga
tatacgacacctaccaccattcagcaaaaagtgttttctgttaccatgtccggtaaagat
gtgtgcggcattgcgcagacgggaaccgggaaaacatttgcttacctccttcccacgctt
cgccagctcgaattttcgaaggatcgcttaccccagcttctcattctcgtcccaacccgc
gaactcgtggtgcaggtggtggaagaagtccggaaactgagcgcatatctgacgttgcag
gtagttggcgtgtatggcggaggcaacatcaaagtgcagatggctgaactgaaaatgggt
gccgatgtggtcgtggcgacaccggggcgactggttgatctggcattgaatagttcgctg
aaaaccaaggcgatcaagaaactggtcattgacgaagtagacgaaatgctcaacctggga
ttcaggacccagctgaaaaatatactggacattcttccgcaaaaacgacaaaacctgctg
ttttcggcaactattacccaggaagtcgaagctctgatgcagacctatttcaacaatcct
gtcagaatcgaggcagcgcctgttggaacccctctggacaacattgaacagaaagcttac
gaggtcccgaatttttataccaaagtaaacctgctggatctgctgctggaacaaaatgag
gatatgagcaaggtcctgatttttgtggccaccaaaaaattggctgatcagctttacgtt
cagctcgaactaggatacctgaacaaaatcggtgtgatacattccaataaggagcaaaat
caccgttttaatacgatcaggcagtttcacgacgggacttatcgcattctcatcgccaca
gacattatcgcacgcgggctggatgtcgcggaagtatcgcatgttttcaactttgatatt
cccgaaatacctgaaaactacattcaccggatcgggagaacaggtcgggccgataaaaaa
ggggttgcgatttcattcattaccgagcgggaaaaggagtttctgacgctgatcgaagag
ttaatggattaccagattcccattacgccattgcccgaaacgcttaaaatctccgaaatt
ctcacaccggatgaagaaccgaaaattttcatgaagaacattgatgtgaaactcccaaaa
agggaatctgtcggtgctgcttttcatgagaaagctgcgaaaaatcagaaagtaaacgtg
cgacggaaccacgcacaggagaaaatgcagaagtacggcagacctatcaaacgatccggc
aagaaatag

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