Dyadobacter pollutisoli: ON006_19940
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Entry
ON006_19940 CDS
T09794
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf00521
Streptomycin biosynthesis
dpf00523
Polyketide sugar unit biosynthesis
dpf00541
O-Antigen nucleotide sugar biosynthesis
dpf01100
Metabolic pathways
dpf01110
Biosynthesis of secondary metabolites
dpf01250
Biosynthesis of nucleotide sugars
Module
dpf_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
ON006_19940 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ON006_19940 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ON006_19940 (rfbC)
Enzymes [BR:
dpf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
ON006_19940 (rfbC)
BRITE hierarchy
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WAC10021
UniProt:
A0A9E8SJR6
LinkDB
All DBs
Position
complement(4893043..4893594)
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AA seq
183 aa
AA seq
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MQIRETSIAGLVEIFPRIFEDDRGMFFESYNEQVFLKLGLPTNFVQDNQSFSKKGVVRGL
HFQNTPFAQGKLVRVISGRVLDVAVDIRPDSPTFGKHEIFELRSDLNNIAYIPEGFAHGF
VALEDSIFSYKCTNIYDKASESGILWNDSDLGIDWGVENPIVSEKDVILPTFKALFGDLK
IKA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcgagaaacttccattgctggtttggttgaaattttcccacgtatttttgaa
gatgatcgcgggatgttttttgaatcctataatgagcaggtattcctaaaattaggtctg
ccgaccaattttgtgcaggataatcagtcattttctaaaaaaggtgtggtgcggggatta
cattttcaaaatactccttttgcccagggaaaattggtgcgcgtcatttccggtcgtgtc
ctggatgttgccgttgatatccgtccggactcgccgacatttgggaagcacgaaattttt
gaactccgtagtgaccttaacaatatcgcctacattccggagggttttgcgcacggtttt
gttgctcttgaagacagcatattcagctataaatgcactaatatttacgataaggcttcc
gaatccggcatactttggaacgactccgatctcggcattgactggggagttgaaaatccg
attgtttcggagaaggatgttatcttgcctacattcaaagcactctttggagatttgaaa
atcaaggcctga
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