Danaus plexippus (monarch butterfly): KGM_207405 Help Entry KGM_207405        CDS       T04344                                  Name (GenBank) hypothetical protein   KO K14400   pre-mRNA cleavage complex 2 protein Pcf11 Organism dpl  Danaus plexippus (monarch butterfly) Pathway dpl03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:dpl00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     KGM_207405  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dpl03021]     KGM_207405    03019 Messenger RNA biogenesis [BR:dpl03019]     KGM_207405 Transcription machinery [BR:dpl03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      KGM_207405 Messenger RNA biogenesis [BR:dpl03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      KGM_207405 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Pcf11_helical CID CFIA_Pcf11 zf_UBZ Motif Other DBs NCBI-ProteinID:  OWR55236 UniProt:  A0A212FNA6 LinkDB All DBs Position Unknown AA seq 1638 aa AA seqDB search MAKEIADEYASSLADLTVNSKPLINMLTILAEENIEHAGVIVETVEKHLEKVPPDIKLPV LYLVDSIIKNVGGAYTQKFSQIIVNMFTKTFKQLPEESIMRECSQVDEKIRSQMFKLRET WHEVFPSTKLYQLDVKVNLIDPAWPIQAQPHQSNIHPTPTTSAAALSEEEEKMRAILAKK EQELLMLQRKKVEMELEQTRRQLQMAEKVHKKPPLVHPPGLPAPQAEAPPVPLAPTSLPP QAPISSPVLSIKQRLGPPVNKSAGRIAPVTGPLSGARRDPRLARRQPPPQRQPPATAHTT PTTAATTIAPNVFDIKPLHRPAKRSAVITIEVATDSRRKDRKETRTKIENGNGDSVHTYI DRLRIPDPKKINKLPPIPKIRRDRDDPPSKKKKELRERKKRRDKDGSASSSPDKKRGKDK DKKVYNKERMDVDDQQYAPETVSFKELKNFNKKHYMRRNKEKSESPERLDKEEKKTSEEA TNPPEIIPETKDVDLRVLHPVIPETAKAIAQKRPSTEMLEGKPKKNKLDKFDILFGNEDV DLRQLPQVEEANAPPPPSISEPNSVSKEEVDPEESDDVIASPVRSPKKDWQEVKEKEETK KTPSKLDLVRAKLAEATKVKDGLGRPLLFSIERERRRTFSSDETEVKTDSNEEFDADDHK KTISIIMNQAKEQFSDGQLDKNQYNTLMYQVLQLNEKLKLKEAKQRESLEISKRKLKAHV SEDKKVPSPKSSPSERNKFGDIDERVPVGGFSDSENNNQDSDMRQNHHDNIDGKSGFPMP PMMPPMYMGPFPMWRGQPRPRMEEFGPRRFRGPYFRGKFDKRGPRPPFDMRMPLLPTPKL GMCQGECPLKPYERSISPPPLGAPGYTLPPTDYKILEYIDQDPVKTIQIDGIPREIRFYG ETAIIMLDWDDPRVIKFLPGCRRVTFDNKDSVVLTFNEGYKKVEIDDQVFDIRFGAPTRE LFINGRWYECFFGGQPLGVIIDGKPRLVHLEGPLPQVDIGKTKRTDLVAGKINVIINATN ICPVYLDAKVQKFHVNGHFFTIRFVDSLKTVLINEQPFKVEYGDLPKPIFVNGEKYFVRF SALPKNIKPGQVEIADMEGCKPSTESEKLPTVPENEDVPMETDSEQPLEAPVKSPSPEGE MKGLDMLANFMPSDMAPASSSEYSSAEPLFTKPEVIPGLETPAEEKPASSLPLLGGINVN DLYAKLVATGIVPMLNEVKPEKKTEVPEIEETKMKPKDDKNVIHKVDILKPETLRIKQRG LVLKLYSGMQCSGCGARFPPEHTVRYSQHLDWHFRQNRRERDSARRAHSRHWHYDLSDWL LYEELEDLEEREKSWFETGGSEETPAQVEAVVEESPSTAAGGAPQHNCALCGDRFHQFYN EDQEEWHLRNAVKHQDSYYHPLCLQDYKASLTKEEPQAEEAAVDVDEEPPAAIEIGDTAE LSDTESVVEVLETEPLEPVEIEADDGDDDVVLNAEPVEQLEVDDGDTDDETTETRRQRDH LAQVDFANIKIKQEPIDPDDEPIITAEVESIPPTIDTTHTTVTSSIDGNVQLDDATLTPA LPIGGIRINISKTITSFATNQDSPDKSLEDISTEDEPLPPGEEPEMEYELKPSMKDVKFS RQPPVQKGSELSGLCSIM NT seq 4917 nt NT seq  +upstreamnt  +downstreamnt atggcgaaggaaattgcggacgagtacgcatcaagcctggcggatttgactgtaaacagc aaaccccttattaatatgctgactatactcgcggaagagaacatcgagcatgcaggagtt atcgttgagacagtggagaaacatttggagaaggtgcccccggacatcaagctgcctgta ctgtatttagtagattccattatcaagaatgttggtggtgcatacacacagaagttctca cagatcatcgttaatatgttcacaaagaccttcaaacagttacctgaagaatctataatg agagaatgttcacaggtcgatgaaaagattcgttcccaaatgttcaagttacgggagacg tggcatgaagtattcccatccactaagttgtaccaactggatgtgaaggtgaacctgatt gatcccgcttggcccatccaggctcaaccacatcagtctaacatccatccaactccgaca accagtgctgcagccctatcagaagaagaggagaaaatgcgtgccatactagctaagaaa gaacaagaactactaatgctgcagaggaagaaggtcgagatggagctggagcagactcgg agacagttacagatggctgaaaaagttcacaagaagccgcccttggtgcatccccctggg ctccccgcgccccaagcggaggccccgccggtccctctggcgcctacatctcttcctcct caagcgcccatatcgtcgccagtactgtccatcaagcaacggcttggaccccctgttaac aagtcggcgggtcgtatcgctcccgtcacgggtccgttgagcggagcgcggcgtgacccg cggctcgcaaggagacagcccccaccacaacgccaaccacctgccaccgcccacaccacc cccaccaccgccgctaccacaatcgcccccaacgttttcgatatcaagccactccaccga ccggccaagcggagcgccgtcatcaccatcgaggtggcgaccgactcgcgccgcaaggac agaaaggaaacacgcaccaaaatagagaacggcaacggggactccgtacacacatacatc gacagactcagaatacccgaccccaagaagataaacaagctgccacccatacccaagata cggcgggacagagacgatccgccctccaagaaaaagaaggaactcagagagaggaagaag cgacgggacaaggacgggtcggcctcctcctcgcccgacaagaagcgaggcaaggacaaa gacaagaaagtttataataaagaaaggatggacgtcgacgaccagcagtacgcgcccgag acggtctccttcaaggaattgaagaacttcaacaagaagcactacatgcggagaaataag gaaaagtcggagagtccagagagattagacaaagaggaaaagaaaacgtcagaagaggct acaaatccgcctgagattatccctgagactaaagatgtagatcttcgtgttttgcatccc gttattccagaaactgccaaggcgatcgcccagaaaagaccgtccactgagatgctcgag ggcaaacctaagaaaaataaactcgataaattcgatatcctttttggaaacgaggacgta gatcttcgtcagttgcctcaagttgaagaggcgaacgcaccaccgccaccgtctatatct gaaccaaattctgtatctaaggaggaagtagatccagaagaatctgacgatgtaattgcg tcgcccgtacgttctcccaaaaaagattggcaagaagtcaaagagaaggaagaaactaaa aagacaccttcgaagttggatctcgtgagagcaaagttggcggaagctacaaaagttaaa gatggcttaggacgtccgttactgttcagcatagaaagagaaagacgtcgaacattcagc tctgatgaaactgaagttaaaacagatagcaacgaagaatttgatgccgatgatcacaag aaaactatctctattatcatgaatcaggccaaggaacagttcagtgacggtcagctggat aaaaatcagtacaacacattgatgtaccaagtgttgcagctcaatgagaagctcaaatta aaggaagctaagcaaagggaatccctagaaatatcaaaacgaaaattgaaagcccacgtc tcagaagataaaaaggtcccttcaccgaaatcttccccgtcggagaggaataaattcggg gacatcgatgaacgagttcccgtcggtggattttctgactcagaaaacaacaatcaagac tctgatatgcgtcaaaatcatcacgacaatatagatgggaagagtggttttccaatgccg cctatgatgccgccgatgtacatggggcctttcccgatgtggagaggtcaaccgcggcct agaatggaagagttcggtcctcgaaggtttagaggtccatattttagaggaaagtttgat aaaagaggcccaagaccacctttcgatatgagaatgcctctacttcccactcctaaactc ggtatgtgccaaggcgaatgtcctctaaagccttatgagcggtcaatttcccctccacca ctcggcgctcccgggtatacattgcctcccactgattacaaaatattggaatatatcgat caggatccggtcaaaactatccaaatagacggtattcccagagaaataagattctacggc gagacggcgatcatcatgctcgactgggacgatcctagagttatcaaattcttaccaggt tgtcggagagtcacattcgataataaagattcagtggtattgactttcaacgagggttac aagaaggtggaaatagacgatcaagtcttcgatatcaggttcggtgcgccgaccagggaa ctgttcataaatgggaggtggtatgaatgtttcttcgggggtcagccattgggcgtcata atagacggcaaaccgcgattagtgcatctagaggggcccctgccacaggtggatataggg aagacgaaacgaacagacttagtagcgggtaaaataaatgttataataaacgcgacaaac atttgtccggtttacttggatgctaaagttcagaagttccacgtaaatggacatttcttt acgatacgttttgtcgattccttgaagaccgttctaattaatgagcagccgttcaaagtg gagtatggggatcttccgaagccgatattcgtaaatggggagaaatactttgtacgattt tctgcactgcccaagaacataaaaccgggccaagtagagatcgctgacatggaaggctgt aaaccatcgacggaatccgagaagctgcccacagtgccggagaacgaagacgttccgatg gaaactgattctgaacaaccgctcgaagctccagtgaaatccccaagtcctgaaggtgaa atgaaaggtttggatatgctagcaaatttcatgccgagtgatatggccccggcttccagc tcagaatacagttctgctgagccgctgttcacaaaaccggaagtgatcccaggattggaa actcccgctgaagagaagccagccagttccctgcctcttttgggcggtatcaatgtcaat gacctgtacgccaaattagttgcgacaggtatagtgccaatgttgaacgaagtgaaacca gagaagaaaactgaagttcctgagatcgaggagacgaaaatgaaacccaaagatgataag aacgtcatccacaaagtcgatatactgaaaccggaaacacttcggattaagcagcgcggt ctggtgctgaaactgtacagcggtatgcagtgcagcggttgcggggcgcggttccctccc gagcacacggtccggtactcgcagcatctcgactggcacttcagacagaacaggcgggag agggactctgcgcggcgggctcactcgcgacactggcactacgatctgtctgactggctg ctgtacgaggagctagaagacctagaagaacgagagaagagttggtttgagacgggaggt tctgaagaaacaccagctcaggtagaagctgttgtagaagaaagtccaagcaccgcggct ggtggagctccgcaacataactgtgccttgtgtggagacagattccatcagttctacaat gaggaccaagaggagtggcatctcaggaatgctgtcaaacatcaggacagttactatcat ccactgtgtctgcaggattataaggcttctctaacaaaggaagagccacaggctgaggaa gcggcggtggatgtagacgaggaacctccggctgcgatagagataggagacaccgctgag ctgtcggacactgagtctgtggttgaagtgttggagactgaacccttggaacctgttgag attgaagctgatgacggtgatgatgatgtggtcctgaacgctgagcccgtggaacagctg gaggtggacgacggagacacagacgatgaaactactgagacgaggaggcagagagatcac ctcgcacaagttgattttgctaacataaagatcaaacaggaacctatcgatccagacgat gaaccaattataacagcagaagtagaaagcattccgccgacaatcgacacaacacatacg actgttacatcatccatagacgggaacgttcagctcgacgacgccacgctgactccagct ctacccatcggtggcatcagaatcaacatatccaaaaccataaccagctttgctaccaat caagatagtccggataagtccctcgaagacatcagcaccgaggacgagcccttgcctccc ggagaggaaccagaaatggagtacgagttgaagccttcaatgaaagacgtgaagttcagc agacaacctcccgtccaaaaaggaagtgaattgtcgggattgtgttctataatgtga

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