Danaus plexippus (monarch butterfly): KGM_215661
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Entry
KGM_215661 CDS
T04344
Name
(GenBank) DNA ligase 4 like protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KGM_215661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpl03400
]
KGM_215661
Enzymes [BR:
dpl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
KGM_215661
DNA repair and recombination proteins [BR:
dpl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
KGM_215661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
TPR_14
RNA_ligase
TPR_1
TPR_19
DNA_ligase_A_C
DNA_ligase_IV
TPR_16
BRCT
TPR_6
TPR_12
TPR_8
TPR_2
TPR_11
NatA_aux_su
ANAPC3
BTAD
BRCT_2
TipAS
TPR_15
Motif
Other DBs
NCBI-ProteinID:
OWR43532
UniProt:
A0A212EPV6
LinkDB
All DBs
Position
Unknown
AA seq
1662 aa
AA seq
DB search
MDVDKDLTNKFLSGEMSFSQYSSEWYSGEEDEDEDEPEESKKYEEEAEMSTTVSKRGLKR
QSKFRRLFPALSGLMGEANIRLARGDSEMAERMCHEIIKQQPTAAEPYQTLAQIYEHDPN
KSLQFSLLAAHLSFTDKSEWWRLAALCRQRSDYKQEMVCYTQAIKSEPQNLETHLKRLEL
LSELEKLPDFPVNSLKVSKVKCYHKIVRSLGPSDAETIMKYAKMAATLYHNSTEVEQAVE
VMGIAYKKCFSLFTLEDINMYLELLITQKQFTKCIEVFVSSIGVEIEAEIQTVKNANGDI
EEQTHYLNCVIPNNLAIDLKSKLLVCFIHLGALNLVQSLLNDFLSSDVEKAGDLYMDIEE
AFSAVGHYEMAIKLLEPLIKNTSFDLGAVWLKYADCLNKLGRHDDAIESYYKVLKHVPQH
ADARRKLFTILENKGRIDDALNILQQDYKFVVSAHLLFDHCQYLKKYNRMLKYLEVGEAL
LSRDLTKFRHPEELRIACRTKGVVELIYNFRSMRGESPYHKDDLQFEEESFSLLPSEEFL
MFKELLSIAKEHKIYSVLQRLTFMGMISKGLSHYRPEMEFYCFQACLLNRDFPNACRFVK
DFSLKYSGPRSFNLLSFILNSLDENTHGKFLSRLFQKDFNIVKNLFLGNNFLVSGRYLVA
LKYFLEYYEQCREPLSALLIAVTILAMAAQRTVDRHHNLILQGLSKCDQEAYYNIGRAYQ
MLSINNLAIEYYERALACPPLAQCEEHGVIDLTKETAYNLYILYKDQSPELARRYMFKVL
FEMNTTGVITPADDVLFGDLCSLLEQLQKKKKHRPEQNKLLSNFVDQFRLKLANTQGSKN
STFFPILRLLLPSCDRERGPYNLKETRLSTLLVKVLSLNKESTDAKQLIHFSSSNNSVLD
SDFPGVAFYVIKKRVGQNNSVLTVREINEILNSVATVDNVHKTPLDEIFSYALKKLTAIE
FKWLLRIILKDLKLSMSADRILGIFHPDAPEVFKNCSSILKVCEELEDGDTRPSELGVNL
FYAVRPMLSERLDITHIHVLDKTKTYCMEEKFDGERFQMHMDNNVFEYFSRKGFKYSKNY
GQSYDSGMLTPYLKDIFAPEARNFILDGEMMGWHKIDNYFGCKAMSYDVKKITENSSFRP
CFCVFDILYYNDRPLIGSPDKGGLPLRERLKILDDLFIDKRGVIEHSKRKIIKESSEVVD
AVNDAIDNQDEGIVVKDINSYYIANKRNAGWYKIKPEYTDDTMNDLDLVVVGADEATNKR
QGRAKSFYVACGDNNDGDPVWTCIGRVSNGLKHEEKERVCSLLERNWCMYRKKPPPPCLR
FGKDKPDFWILPEHSIVLQVRATELLSVGDSHVLRFPRVEDIRSDKPVDDVCTIHELRQL
AVSRSPVSKLSTKRVNESQIDQNYIKTRKRGLSKTVQVAEKFRTKTIGDVQVISRALFGK
KLCVLSDDEDCKKTELKRVIESHGGRHVENPGSDTWCCVVGTITPRARRLIETQDLDIIS
TAWLRSLPATDDPCQLSPLDMLSIKPETKLKLSLDYDPFGDSYKDEIDEKTLKKLLDKMD
SEFPLYPTLKEKVCLDKQLFGANNPYSFLRNCFIHVIDNSLYETMASFFGAKICSLDDVR
LTHVVMSKDANVKIDKGILVSDGWLEECFNKRSFVPVDDYLI
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggataaagatcttactaataaatttttaagtggtgagatgtctttctcccaa
tactctagtgaatggtatagtggagaagaggatgaagatgaagatgagccagaggaatcc
aaaaaatatgaagaagaagctgaaatgtctaccacagtttcaaagagaggtcttaaacga
caatccaagttccgtcgcctctttcctgcattatctggtcttatgggagaagcaaatata
aggcttgccaggggtgatagtgaaatggctgaacgtatgtgccatgaaataatcaaacaa
caacccacagcggctgaaccatatcaaaccttagcacaaatatacgaacatgatcccaat
aaatcattgcagttttctttgcttgctgcacatttgagttttacagacaaaagtgaatgg
tggagactcgctgcattatgtagacagagaagtgattataaacaggaaatggtctgttac
actcaggctataaaatctgagccacaaaatttagagacacacttgaaaaggctagagttg
ttgtcagaattagaaaaactaccggactttcccgttaattcactgaaagtatctaaggtg
aaatgttatcacaaaattgtacgttccttaggacctagtgatgctgaaacaattatgaag
tatgccaaaatggctgcaactttatatcacaacagcaccgaagttgaacaagcagttgaa
gtgatgggtattgcatataaaaaatgcttttcattatttacattggaggatattaatatg
tatttggagctgttaattactcaaaagcagttcaccaaatgtattgaagtatttgtttca
agtataggtgtggaaattgaagctgaaattcaaacagtgaaaaatgctaatggtgatatt
gaagaacaaacacactaccttaattgtgttatacccaataacttagctatagatttgaaa
agtaaactattggtgtgctttatacatttaggagcacttaatttggtccaatcattgctt
aatgattttttgagcagtgatgttgaaaaagctggagatctctatatggatatagaagaa
gcattttcagctgttggtcattatgagatggctataaaattattggagcctctaattaaa
aatactagctttgatttaggagctgtatggcttaaatatgcagattgcctgaacaagttg
ggaagacatgatgatgctatagaatcatattacaaagtgttaaagcatgtgccacaacac
gctgacgcgaggcgaaagctgtttacaattctagaaaacaaaggaagaattgatgacgct
ttgaacattctacagcaggattacaaatttgtcgtcagcgctcatctactgtttgatcat
tgtcaatacttaaagaaatataatagaatgttgaaatatttggaggtaggtgaagctctg
ctatctcgagatttgacaaaatttagacatcccgaagaattaagaatcgcttgtaggaca
aagggtgtggtagaacttatttacaattttcgatctatgagaggcgaaagtccttatcat
aaggatgatttgcaatttgaagaagaatcttttagccttttacctagcgaagaattctta
atgttcaaagaacttttaagtatagcaaaggaacacaaaatttatagcgttttacaaaga
ttaacatttatgggtatgatatcgaagggtttgtcgcattaccgaccagaaatggaattt
tattgctttcaagcgtgtcttcttaatcgagacttcccgaatgcttgtcgatttgttaaa
gacttttctctaaaatattccggaccacgatcctttaatttgctaagcttcatccttaat
tctttggacgaaaacactcacggaaaattcttatcgcgactgtttcaaaaagattttaat
attgttaaaaatctttttttgggtaataatttcctagtatctggaagatatcttgttgct
ctgaaatactttcttgaatattacgagcagtgcagagagcctctgtcagcgttacttata
gctgttactatattggccatggcagctcagagaacagtggacagacatcataatttaatt
ttacagggcttatctaagtgcgatcaggaagcgtattacaatatagggcgagcttatcaa
atgttgagtattaataatctggccattgaatactatgagcgagccctggcgtgccctcct
cttgctcaatgtgaagaacatggcgttatagatttaactaaagaaactgcttacaatctg
tatatattgtataaagaccaatccccagaattagctcggcgatatatgtttaaagtattg
tttgaaatgaatacaactggtgtaattactccagcggatgatgtattattcggtgatcta
tgttcattgttagaacaattgcagaagaagaagaaacacagaccagaacaaaataaacta
ttatcaaattttgttgaccaatttaggttaaaattagctaacacgcagggctccaagaac
tctactttttttcccatattgaggttgctcttgccaagttgtgatcgggaacgtggtccc
tacaaccttaaagaaaccagactaagtactttattggtaaaagtactgtctctcaataaa
gagtcgacagatgcgaaacaactgatacattttagttcttcaaataactcagttctagat
agcgacttccctggtgtcgcgttttacgttataaagaaaagagttggtcagaataattca
gtattgacagtcagagagatcaatgagatacttaactctgttgcaactgtagataatgtt
cataaaactccattggatgaaatttttagttatgctttaaaaaaactgactgccatcgaa
ttcaaatggcttctgagaataatattaaaggatttaaaattaagtatgagtgcagatcga
atcttggggattttccatccagatgccccagaggtcttcaagaactgcagcagtatttta
aaggtgtgcgaagaattagaagatggcgacactcgaccatcagaactgggcgtcaatttg
ttctacgctgtaagaccaatgctgtctgagaggttggacatcacacacatacacgtcttg
gataagacgaagacctactgtatggaggagaagtttgatggtgagagattccagatgcac
atggataacaacgtatttgaatacttttcacggaaaggtttcaagtactccaaaaactat
gggcaaagttacgactccggcatgttaacgccgtatttgaaggatatttttgctcctgag
gcgaggaatttcattcttgacggtgaaatgatgggttggcacaaaatagataattatttc
ggatgcaaagcgatgtcatacgatgttaagaaaatcacagagaacagttcgttccgccct
tgcttttgcgtgtttgatattctatattataacgacagaccactcatcggctcgccagat
aagggcggtttacctttacgggaacgactcaaaatactcgacgatctattcatagacaag
cgaggtgttatagaacatagcaagcgaaaaattatcaaagaaagttcagaagttgtggac
gccgtcaacgatgccatagacaatcaggacgagggtattgtagttaaagatataaattca
tactacatcgctaacaaaagaaacgctggctggtacaaaataaaaccggagtatacggac
gacaccatgaatgacctagacctggtggtggttggtgctgatgaagccaccaacaaaaga
caggggcgtgccaaaagtttctatgtcgcgtgtggggataacaatgatggcgaccctgtc
tggacctgcattggccgcgtgtctaacggactgaagcacgaggagaaggaacgcgtttgt
tcattacttgaacggaactggtgtatgtataggaaaaaacctccgcctccctgtctgcgc
ttcggcaaagacaagccggacttctggatacttccagaacattctatcgtattgcaggtg
cgtgccaccgagctgttaagcgttggggactcacacgtgctgcgattcccgcgcgtggaa
gatataagatcagacaagccggtcgatgacgtgtgcacaatacacgaacttagacaactg
gctgtgagcagaagcccggtcagtaagctaagtacaaagcgcgtaaacgaatcgcaaata
gatcaaaactatattaaaacacgcaagcgcggtctgtctaagaccgtccaagtagcggaa
aaattccgcacaaagacgattggagacgtgcaagttatatcacgagctttgtttgggaag
aaactttgtgtgttgtcggatgacgaggattgtaagaaaacggaattgaaacgcgtcata
gagtcccacggagggagacacgttgagaacccaggttcagatacttggtgctgtgtagtg
ggaactataacaccgcgagcccgtagactcatagagacacaagacctagacatcattagc
acagcctggctcagaagcctaccagcgacagacgacccgtgtcaactgtcgccattggac
atgctatcaatcaaacccgaaacgaagctcaaactgagcctagactacgaccccttcggt
gatagttacaaggatgaaatagatgaaaaaacattgaagaaactgctggacaaaatggat
tcggagttcccgttgtatccaactttaaaagaaaaagtctgtctggataaacaattattc
ggcgccaacaatccttactcatttttgaggaattgtttcattcacgttattgacaattcg
ctttacgaaactatggcgtcctttttcggagccaaaatctgttctctcgatgacgtcaga
ctgacgcacgtcgttatgtcaaaagacgcgaatgtcaaaatagataaaggaattctagtg
tcggatggatggttggaagaatgttttaacaaaaggagttttgttcctgtcgatgattat
ctaatttaa
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integrated database retrieval system
