Dialister pneumosintes: BCB69_03720
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Entry
BCB69_03720 CDS
T04459
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
dpn
Dialister pneumosintes
Pathway
dpn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCB69_03720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpn03400
]
BCB69_03720
DNA repair and recombination proteins [BR:
dpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCB69_03720
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BCB69_03720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_7
AAA_25
Kinesin
AAA
Microtub_bd
AAA_5
DUF87
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AOH39147
UniProt:
A0A1B3WDW2
LinkDB
All DBs
Position
complement(750500..752605)
Genome browser
AA seq
701 aa
AA seq
DB search
MNNSRIKRNYREPPVPFTLKAPFKPMGDQPKAISQLVNGLQDGHWAQVLVGATGTGKTFT
MANIIEKVQRPTLIISPNKTLAAQTSSEIKDFFPNNAVYYFVSYYDYYQPESYLPTTDTY
IEKDSSMNEEIDRLRHSATMSLFERRDVIIVASVSCIYGLGDPEDYSAMGLSLRPGDMIS
QDELLTRLVEMQYLRNDVNFTRDAFRVHGDTIDVFPASSNNTAVRIEMFGDEIDRLTEFD
VLTGQTVAERNHIGIFPASHYVTTGPKLRRAVSSIEQELQERLQVLKSEDKLLEAQRLKQ
RTEYDLEMMQEVGYCSGIENYSRHMSARNPGDPPFTLLDYFPDDFLLMIDESHVTVPQLR
AMYNGDRARKTTLVDYGFRLPSALDNRPLTFDEFTERINQVIYVSATPSAYELGAQTNLA
EQIIRPTGLLDPSIEVRPIEGQIDDLLGEIHKREEVDERVLITTLTKKMAEDLTDYLKEV
GVKVRYLHSDIATIERAEIIRDLRAGVFDVLVGINLLREGLDMPEVSLIAILDADKEGFL
RSETSMIQVIGRAARNAHGHVIMYADRMTKSMKHAIDETNRRRKIQQTYNEEHGIIPKTV
QKKVKDLIDLTKVEEGSSSYDVTHNTKELSDDALYQQIIDTEKDMKRAAEALEFEEAALW
RNQLATLKQQWNDRFGSRSHMAMKQKKSGKNRINRELKKKV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaataattccagaataaaaagaaattatagagagccaccagttccgtttactttaaaa
gcaccatttaaaccgatgggagatcaaccgaaagccattagtcaattggtaaatggcttg
caagatgggcattgggcacaggttttagtgggtgctactggtacggggaaaacttttaca
atggcaaatattattgaaaaagtacaacgaccgacgttgattatttcaccgaataaaaca
ttggcagcacaaacatcgagtgagattaaagattttttcccgaataatgcagtctattat
tttgtaagctattatgattattaccaaccggaatcgtatcttcctacaacggatacttat
attgaaaaagattcttcgatgaatgaagaaattgacaggcttcgtcactcggcaacgatg
tctttgttcgaacgtcgagatgttatcattgtagcttctgtttcttgtatatatgggtta
ggagatcctgaagattatagtgcaatggggttatctcttcgtccgggagatatgatttct
caagatgaactgttgactcgtttggtggaaatgcaatatttacgtaatgatgtcaatttt
actcgtgatgcttttcgtgttcatggagatacgattgatgtatttcctgcttcatcgaat
aatacggctgttcgtatagaaatgtttggtgatgagattgatcgattgacagagtttgat
gttcttacaggacaaaccgttgcagaacgaaatcatatcggaatttttcctgcttctcac
tatgtaacaacaggtcctaagttaagacgtgcggtcagcagtatagagcaagagttacaa
gaacgtttacaagtgttaaaatcggaagataaattactggaggcacagcgacttaagcaa
cgaacggaatatgatttggaaatgatgcaggaagtaggatattgttcgggaatagaaaat
tattccaggcacatgtcagcacgaaatcccggagatccgccttttacattattggattat
tttccggatgactttctacttatgattgatgaatcacatgttacagttcctcaacttcga
gccatgtataatggagatagagctagaaaaacgacgttggtagattatggatttcgtttg
ccaagtgcattagataatagacctttaacttttgatgagtttacagaaagaattaatcag
gttatttatgtatcggcgacaccgagtgcctatgaattgggggcacaaactaacttggcg
gaacaaattattcgtccgacgggattattggatccaagtattgaagtacgtccgattgag
gggcaaattgatgatttgttgggagagattcataaacgtgaagaggtcgatgaacgtgtg
cttattacgacactgaccaaaaagatggcggaggatttgacagattatttaaaagaagta
ggcgttaaagttcgttatcttcactccgatattgcaacgattgaacgtgctgaaattatt
cgagatttacgtgctggagtttttgatgttttagtaggaattaacttattaagagaaggt
ttggatatgccggaagtatctttgatagctattctggatgcggataaagaaggattttta
cgatcagaaacatcgatgattcaggtcattggtcgtgcagcacgcaatgctcacggacat
gtcattatgtatgcagatcggatgactaagtcgatgaaacatgctattgatgaaaccaat
cgtcgtagaaaaattcagcaaacatacaacgaagaacatggtattattcctaaaaccgtt
cagaagaaagttaaagatttgattgatttaacaaaggtagaagaaggaagttcttcttat
gatgtcacacataatactaaagaactttctgatgatgctttgtatcaacagataatagat
acagaaaaagatatgaaacgagctgcagaagcacttgaatttgaagaagcagctttgtgg
cgtaatcaattggcaactcttaaacagcaatggaatgaccggttcggttctcgttcacat
atggcgatgaagcaaaaaaagagtggaaaaaatagaattaatagagaattaaaaaagaaa
gtataa
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