KEGG   Drosophila pseudoobscura: 4812089
Entry
4812089           CDS       T01032                                 
Name
(RefSeq) histone deacetylase HDAC1 isoform X3
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
dpo  Drosophila pseudoobscura
Pathway
dpo03082  ATP-dependent chromatin remodeling
dpo03083  Polycomb repressive complex
dpo04213  Longevity regulating pathway - multiple species
dpo04330  Notch signaling pathway
dpo04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:dpo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    4812089
   03083 Polycomb repressive complex
    4812089
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    4812089
   04350 TGF-beta signaling pathway
    4812089
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    4812089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dpo03036]
    4812089
Enzymes [BR:dpo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     4812089
Chromosome and associated proteins [BR:dpo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     4812089
   HDAC complexes
    Sin3A-HDAC complex
     4812089
    BRAF-HDAC complex
     4812089
    REST complex
     4812089
    SHIP complex
     4812089
    MiDAC complex
     4812089
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     4812089
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    4812089
  Chromatin remodeling factors
   NuRD complex
    4812089
SSDB
Motif
Pfam: Hist_deacetyl Herpes_capsid
Other DBs
NCBI-GeneID: 4812089
NCBI-ProteinID: XP_001352649
UniProt: A0A6I8UB48
LinkDB
Position
X:59085564..59088453
AA seq 530 aa
MQSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAD
EMTKFHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAV
KLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDG
VEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFV
PIISKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVDFVKKYNLPFLMVGGGG
YTIRNVSRCWTYETSVALAVDIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKI
KNRLFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRLPQSDKDKRIVPENEYSD
SEDEGEGGRRDNRAYKGQRKRPRLDKDNNSNKASSEASSEIKDEKEKVDGADGEESTASN
ANSNSNNNSSSNNKSDNDSSAPASGATTGGGSGSGSGSGSGAKAAKENNI
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgcaatctcacagcaagaaacgcgtctgctactactacgacagtgacattggcaactac
tactatggccaggggcaccccatgaagccccaccgcatacgcatgacccacaatctgctc
ctgaactacggtctataccggaaaatggagatttaccgaccacacaaagccactgccgat
gagatgaccaagttccattcggacgagtacgtccgattcctgcgatccatcaggccggac
aacatgaccgaatataacaagcagatgcagcgcttcaatgtaggcgaagattgccccgtg
ttcgacggtctctacgagttctgtcagctgtcggcgggtggctccgtggccgcagccgtc
aagctgaacaaacaggcctccgagatctgcatcaactggggcggcggtctgcatcatgcg
aaaaaatcggaagcctctggattctgctatgtgaatgatattgttctgggcatcttggag
ctgctaaagtaccaccagcgtgttctctacatcgacatcgatgtgcaccacggcgatggt
gtcgaggaggccttttacaccacggaccgcgtgatgaccgtcagcttccacaagtacggc
gagtacttcccgggcactggcgacctgcgcgacattggcgccggcaagggcaagtactat
gccgtcaatatccccctacgcgatggcatggacgatgacgcgtacgagagcatcttcgtg
cccataatttcgaaggtaatggagacattccagccggcggcggtggtcctgcaatgcggc
gcggactcccttaccggcgaccggctcggctgctttaacctgacggtgaaggggcacggt
aagtgcgtcgatttcgtaaagaagtacaacctacccttcctgatggtcggcggcggtggc
tacaccatccgcaacgtctcccggtgttggacgtacgagacgtccgtggcgctggccgtg
gacattgccaacgaactgccctacaacgactacttcgagtactttgggcccgacttcaaa
ctgcacatcagccccagcaacatgactaaccagaacacgtccgagtatctggagaagatc
aagaacaggcttttcgagaacctgcgcatgctgccacacgcaccgggcgtccagatccag
gccatacccgaggacgcgatcaacgatgaatccgacgatgaggacaaggtggataaggat
gatcgcctgccgcagagcgacaaggataagcgcattgtgcccgaaaacgagtactcggac
tcggaggatgagggcgagggcggacggcgggacaaccgcgcatacaagggacagcgcaag
cgtccgcgactcgacaaggataacaacagcaacaaggcatcctcagaagcgtccagcgag
attaaggatgagaaggagaaggtagacggcgctgatggcgaagaatcgacggcatccaat
gccaacagcaacagtaacaacaacagcagcagcaacaacaagagcgataacgattcgagt
gcgccagccagcggggcaacgactgggggcggttcaggatcgggttccggctccggttcg
ggggccaaggccgccaaggagaacaacatatga

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