Drosophila pseudoobscura: 4812089
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Entry
4812089 CDS
T01032
Name
(RefSeq) histone deacetylase HDAC1 isoform X3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03082
ATP-dependent chromatin remodeling
dpo03083
Polycomb repressive complex
dpo04213
Longevity regulating pathway - multiple species
dpo04330
Notch signaling pathway
dpo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
4812089
03083 Polycomb repressive complex
4812089
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
4812089
04350 TGF-beta signaling pathway
4812089
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
4812089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpo03036
]
4812089
Enzymes [BR:
dpo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
4812089
Chromosome and associated proteins [BR:
dpo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
4812089
HDAC complexes
Sin3A-HDAC complex
4812089
BRAF-HDAC complex
4812089
REST complex
4812089
SHIP complex
4812089
MiDAC complex
4812089
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
4812089
Heterochromatin formation proteins
Other heterochromatin formation proteins
4812089
Chromatin remodeling factors
NuRD complex
4812089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Herpes_capsid
Motif
Other DBs
NCBI-GeneID:
4812089
NCBI-ProteinID:
XP_001352649
UniProt:
A0A6I8UB48
LinkDB
All DBs
Position
X:59085564..59088453
Genome browser
AA seq
530 aa
AA seq
DB search
MQSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAD
EMTKFHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAV
KLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDG
VEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFV
PIISKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVDFVKKYNLPFLMVGGGG
YTIRNVSRCWTYETSVALAVDIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKI
KNRLFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRLPQSDKDKRIVPENEYSD
SEDEGEGGRRDNRAYKGQRKRPRLDKDNNSNKASSEASSEIKDEKEKVDGADGEESTASN
ANSNSNNNSSSNNKSDNDSSAPASGATTGGGSGSGSGSGSGAKAAKENNI
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctcacagcaagaaacgcgtctgctactactacgacagtgacattggcaactac
tactatggccaggggcaccccatgaagccccaccgcatacgcatgacccacaatctgctc
ctgaactacggtctataccggaaaatggagatttaccgaccacacaaagccactgccgat
gagatgaccaagttccattcggacgagtacgtccgattcctgcgatccatcaggccggac
aacatgaccgaatataacaagcagatgcagcgcttcaatgtaggcgaagattgccccgtg
ttcgacggtctctacgagttctgtcagctgtcggcgggtggctccgtggccgcagccgtc
aagctgaacaaacaggcctccgagatctgcatcaactggggcggcggtctgcatcatgcg
aaaaaatcggaagcctctggattctgctatgtgaatgatattgttctgggcatcttggag
ctgctaaagtaccaccagcgtgttctctacatcgacatcgatgtgcaccacggcgatggt
gtcgaggaggccttttacaccacggaccgcgtgatgaccgtcagcttccacaagtacggc
gagtacttcccgggcactggcgacctgcgcgacattggcgccggcaagggcaagtactat
gccgtcaatatccccctacgcgatggcatggacgatgacgcgtacgagagcatcttcgtg
cccataatttcgaaggtaatggagacattccagccggcggcggtggtcctgcaatgcggc
gcggactcccttaccggcgaccggctcggctgctttaacctgacggtgaaggggcacggt
aagtgcgtcgatttcgtaaagaagtacaacctacccttcctgatggtcggcggcggtggc
tacaccatccgcaacgtctcccggtgttggacgtacgagacgtccgtggcgctggccgtg
gacattgccaacgaactgccctacaacgactacttcgagtactttgggcccgacttcaaa
ctgcacatcagccccagcaacatgactaaccagaacacgtccgagtatctggagaagatc
aagaacaggcttttcgagaacctgcgcatgctgccacacgcaccgggcgtccagatccag
gccatacccgaggacgcgatcaacgatgaatccgacgatgaggacaaggtggataaggat
gatcgcctgccgcagagcgacaaggataagcgcattgtgcccgaaaacgagtactcggac
tcggaggatgagggcgagggcggacggcgggacaaccgcgcatacaagggacagcgcaag
cgtccgcgactcgacaaggataacaacagcaacaaggcatcctcagaagcgtccagcgag
attaaggatgagaaggagaaggtagacggcgctgatggcgaagaatcgacggcatccaat
gccaacagcaacagtaacaacaacagcagcagcaacaacaagagcgataacgattcgagt
gcgccagccagcggggcaacgactgggggcggttcaggatcgggttccggctccggttcg
ggggccaaggccgccaaggagaacaacatatga
DBGET
integrated database retrieval system