Drosophila pseudoobscura: 4814431
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Entry
4814431 CDS
T01032
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4814431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpo03041
]
4814431
Enzymes [BR:
dpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
4814431
Spliceosome [BR:
dpo03041
]
Complex A
U2 snRNP components
U2 related factors
4814431
Complex B
4814431
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
4814431
NCBI-ProteinID:
XP_001355197
UniProt:
A0A6I8UGL7
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Position
X:5966879..5971291
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AA seq
1241 aa
AA seq
DB search
MSKSSGRDRERERDRDRDRERDRDSKHESRGSRDNHPHESRGSRDYEMSKSRNGGGNSAG
SSSRGSRDDRKRGKELSSRDKDNDRGRRDDKRRRRSWSKEYDKDKRQDKERDRDRERQRE
REKDRERDKDKERDREKDRDRERDRERHRDRETERRHPVAVAPLVIRLSSSSSSDAEVEE
IDKEEQQRRLEQEMIKRRERIERWRAERKRENKASAPAVVKTAKKWSLEDESEEDDSNHA
PPLDSSAKKDTEEPDSPPSKFHSIRKRFDDDVVEAKFSPMKRPTFSKTFGVKLGIGLSPT
SSTSKSNKVDKKEIPGGDTKSKIKKESEASKPIEPKVEPKNEENTPPLPPVGPPEPPPPA
TAAPAPAVVVPEAAAAVVKQEPAEAKQEEPKKQPEEEIDPLDAYMQEVNKEMRRVNNFVE
PPSQTQGVVILTGVAKKKSTESKKGELIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKE
LAKIDHSSVSYAPFRKNFYVEVPELSRMTPSDVEKYRTELEGVQVKGKGCPKPIKTWAQC
GVSKKEMDVLRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQ
PNLDEGDGAIAIIMAPTRELCMQIGKDIRRFSKSLGLRPVCVYGGTGISEQIAELKRGSE
IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTV
MFSATFPRQMEALARRILKKPIEVIVGGRSVVCKDVEQHVVILNDESKFFKLLELLGIYQ
EAGSIIVFADKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATS
VAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRA
LDLSGCLVPAELQTLWTEYKSAQEAEGKKVHTGGGFSGKGFKFDEQEFNAVKESKKLQKA
ALGLADSDDDEDIEQDIDQQIEQIFAAKRTVKDTSITAATAAAAAAAAAAAAVGGNAALA
TAAAQAAAAATAANLAMASASSTTGAGQQATPGIVLSSDKLELAKRLASKINSSKNLDTK
GSQVSSVEPILKGHPAAGSVLTARTVAEQMAAKLNNKLNYQPKEDEEAIGTLIANSNSFT
KYEEELEINDFPQQARWKVTSKEALAQISEYSEAGLTVRGTYVPQGKPPPEGERKLYLAI
ESCSELAVQKAKREITRLIKEELLKLSSSHHVFNKGRYKVV
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagagctctgggcgtgaccgggagcgagaacgcgaccgggacagagatcgcgag
cgggaccgcgacagcaagcatgagagccgcggcagtcgggataaccatccacatgagagc
cgtggcagtcgggactatgagatgagtaaatctcgtaatggaggcggcaacagtgccggt
agcagctcgcgcggcagccgcgatgaccgcaagcgtggcaaggagctgtctagtagggac
aaggacaatgatcgcgggcggcgtgatgacaagcgacggcggcgatcctggtcgaaggag
tatgataaggataagcgccaggataaggaacgcgacagagatcgcgaacgtcagagggag
agggaaaaggatcgggagcgtgacaaggataaggaacgcgacagggagaaggatcgggat
cgcgagcgggaccgcgaacgtcacagagatcgtgagacagaacgacgacatccggttgcc
gttgcccccctagtcatccgcctgtcctcctccagctcttccgatgcggaggtggaagag
atcgacaaggaggagcaacagcgtcgcctagagcaagagatgatcaagcgtcgcgagcgc
atcgagcgttggcgggccgaacggaagcgtgaaaacaaggcgtccgcaccagccgttgtg
aaaacggctaaaaagtggagcctggaggacgagtccgaggaggacgacagcaatcacgca
cctccgctggatagcagcgccaagaaagacacagaggagcccgactcgcccccatccaag
tttcacagcattcgcaagcgtttcgatgatgatgtggtcgaagcgaaattctcgcccatg
aagcgtcccacctttagcaagaccttcggtgtgaagctcggcataggtttgtctcccact
tcgtctacgtccaaatcgaacaaagtcgataagaaggagattcccggtggagataccaaa
tcgaagatcaaaaaagagtcagaggcaagcaaaccaattgagcccaaagttgagcccaaa
aatgaagagaacaccccaccactaccaccagtaggaccaccagagccaccaccaccagca
acagcagcaccagcaccagcagtggtggtgccagaggcagccgcagcagtcgtcaagcag
gagccagccgaagcgaaacaggaagagcccaagaagcagccagaagaggagattgatccg
ttggatgcctacatgcaggaggtcaacaaggagatgcgacgcgtcaataactttgtggag
ccgcccagccaaacccagggcgttgtcatactcacgggcgtcgccaagaagaagtcaact
gagtcgaaaaagggcgaactgattgaacagaatatggacagcctggagtactcgagtgag
gatgagctggaggacatacgcgacacggccgtcaatctggcaatgaagcatcgcaaggag
ctggctaagatcgatcactcgtcggtgagctatgccccatttcggaagaacttttacgtg
gaagtgcccgaattgtcgcgcatgaccccatcggacgtggagaagtatcgcacggagctg
gagggtgtccaagtgaaaggcaagggctgtcccaagcccattaagacatgggcacagtgc
ggcgtcagcaagaaagagatggatgtgctgcggaagctgggctttgaaaagcccacgcca
atccagtgccaggccataccggccatcatgtccggacgggatctgataggtattgctaaa
actggcagtggcaagacgttggcattcattttaccaatgtttaggcacatcctggaccag
ccgaacctcgacgagggcgatggtgccatcgctatcataatggcaccgacacgcgaactc
tgcatgcagatcggcaaggacatcaggcgctttagcaagagtctgggcctgcggccagtc
tgcgtttacggcggcactggcatttccgaacagatcgccgaactgaagcgcggctctgag
ataattgtgtgcacaccaggacgcatgatcgatatgctggccgcaaactcgggccgtgtc
accaatctgcgtcgcgtcacgtacgtcgttttggacgaggccgaccgcatgttcgacatg
ggcttcgagccgcaggtgatgcggatcattgacaatgtgcgcccagatcggcagacggtg
atgttcagcgccacattccctcggcaaatggaggccctggcacgtcgcatcctgaagaag
cccatcgaggtgattgtaggcggccgatcggttgtgtgcaaggatgtggaacagcatgtg
gtcatacttaacgacgagtccaagttcttcaagctcctggaactgctgggcatctaccag
gaggcgggcagcatcattgtctttgcggacaagcaggagaatgccgacattctgctgcgc
gatctcatgaaggcctcgtatccctgcatgagtctccatgggggcatcgatcagtttgac
cgtgactccaccatcattgactttaagtccggtaaggtgcgactcctgattgccacctcg
gtggcagcacgcggcctcgatgtcaaggatctcattctggtggtcaactacgatgtgccc
aatcactacgaggactatgtccacagatgtggtcggactggtcgtgcgggcaaaaagggt
agcgcctacacgttcatcactcccgaacagtcgcgctatgcaggcgacattatacgggcg
ctagatctctctggttgcctggtgcccgctgaactgcagacgctgtggaccgaatacaag
tctgcccaggaggccgagggcaagaaggttcacactggcggcggcttcagcggcaagggc
ttcaagtttgacgagcaggagttcaatgccgtcaaggagagcaagaagctgcagaaggcc
gccttgggtctggccgattcggacgacgacgaggatatcgagcaagacattgaccagcag
atcgagcagatctttgccgccaagcgcaccgtcaaagacacttcgattacggctgccact
gcagctgctgctgcggctgctgctgccgccgctgctgtcggtggcaatgcggccctggcc
acagcggccgcccaagcggcagcggcggctacggcagccaatctggcaatggcctcggca
tcatcgactacaggagctggacaacaggcgacgcccggcattgttctgagttccgacaaa
ttggaattggcaaagcgtctggcatcgaagatcaacagcagcaagaacctggacacgaag
ggcagccaggtgtcgtcagtggagcccatactgaagggtcaccccgcagcgggttccgtg
ctgacggcccgaacggtagccgagcagatggccgccaagctgaacaacaagctcaactat
cagccgaaggaggatgaggaggccattggcaccttgatagccaatagcaattcgtttacc
aaatacgaggaggagctcgagatcaatgactttccccagcaggcacggtggaaggttacc
tccaaggaggcgctcgcccaaatctccgaatactcggaggcgggcctaacggtgcgtggc
acctatgtgccccagggcaagccgccgcccgagggcgagcgcaagctctatctggccatc
gagagctgcagcgagttggccgtccagaaggccaagcgcgagatcacacgcctcatcaag
gaggagctgctcaaactaagttcgtcgcatcacgtcttcaacaagggtcgctacaaggtg
gtctag
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