Drosophila pseudoobscura: 4817272
Help
Entry
4817272 CDS
T01032
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4817272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpo03021
]
4817272
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4817272
Transcription machinery [BR:
dpo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
4817272
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
4817272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_4
zf-CCCH_2
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
4817272
NCBI-ProteinID:
XP_001356742
UniProt:
I7LZD3
LinkDB
All DBs
Position
4:23463119..23464233
Genome browser
AA seq
282 aa
AA seq
DB search
MDILLANVNSLQFKAERDLIEQVGAIPLPFYGMDKSIAAVCNFITRSGQECDKGSACPFR
HIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQ
SKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMNYLAGFCPEGPNCKHMHPRFELPPLADLS
KDQLHKKLPTCHYCGELGHKANSCKQYAGSLENRNNINAMDHSGGDGNDDGPLSHPPPPF
LKIPTPLEEITCYKCGHKGHYANKCPKGHLAFLSSARTHRSE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggacatacttttggccaacgtgaacagcctgcagttcaaggcggagcgggatctcatc
gagcaggtgggcgccattccgctcccgttctatggcatggacaagtccatcgctgccgtc
tgcaatttcatcacaagaagtggccaagagtgcgacaagggaagcgcgtgcccgttccga
cacatacgtggcgaccgcaccatcgtctgcaagcactggctgcgcggcctctgcaagaag
ggggaccagtgcgagttcctacacgagtacgacatgaccaagatgcccgaatgctacttc
tactcccgcttcaatgcctgccacaacaaggagtgccccttcctgcacatcgacccgcag
agcaaggtcaaagactgcccctggtacaagcgaggcttctgccgccacggcccccactgt
cgccatcagcatctgcggcgcgtgctctgcatgaactacttggccggcttctgcccggaa
ggacccaactgcaagcatatgcacccgcggttcgagctgccgcccctggctgacctcagc
aaggatcagctacacaagaagctacctacatgccactactgcggcgagctcggccataag
gccaattcgtgcaagcaatacgcaggtagcttggagaaccgcaacaacatcaacgccatg
gaccacagtggcggcgatggcaacgacgacggccctcttagtcatccgcctccaccattc
ctgaaaataccaacgccgctggaggagatcacctgctacaagtgcgggcacaaggggcac
tatgccaacaagtgtcccaagggccacctcgcgtttctctccagtgcccgaacgcatcga
tcagaatga
DBGET
integrated database retrieval system
