KEGG   Drosophila pseudoobscura: 6896924
Entry
6896924           CDS       T01032                                 
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
dpo  Drosophila pseudoobscura
Pathway
dpo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dpo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    6896924
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dpo03400]
    6896924
Enzymes [BR:dpo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     6896924
DNA repair and recombination proteins [BR:dpo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     6896924
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme CCDC32
Other DBs
NCBI-GeneID: 6896924
NCBI-ProteinID: XP_002137109
UniProt: A0A6I8V391
LinkDB
Position
2:complement(5762390..5765263)
AA seq 809 aa
MLGVAKSKSHIRFLTRLGSSVMGSKRTENEDNRLDTFRRVCDEIAAESSYLKKVDKLQNF
FEKGTSGSGFEGDTLLWVQFLIPVANQRVYNLQNKALIKLFSRIFNANQQQMHLDLEQDG
DVSETLRKHFADSSKLKPQKQSKLYLHEVEKLLTQLEERTKEDEQTELLQELCKKATDLD
LRTFIRLVKQDLRINARARHILDAFGPDAYPAYQSSRDLSAIVEQFSGKGNKTSTLGEVK
KTKKVGLSGGGIQVMTPISPMLANACKSVEEAFKKSPSGLYGEVKYDGERVQIHKQGTEF
KFFSRNLKPVMDHKIKALKDHIPRAFPGAGDMILDSEIILVDTESGAMLPFGTLGAHKKQ
TFANASVCLFVFDCILYDGEDLTQLEFHKRRKILEENINPLKSYVQLSESQFLKTKNELA
MMTAKVLHANLEGVVLKSPNGIYQPGKRNWLKVKKDYLFEGKMADTADLVVLGAWYGSGK
KGGVLSIFLMGCYDARDRLWKTVTKVHSGLDDATNEEIHGSLMKLTERADANKTPNWLLC
KKSLVPDVLAKDPASMPVWEITGAEFTKSEAHTAAGISIRFPRITRLRSDKTAKEANDLA
HLENLYDASKKNVNVDLLLANCDEDALNGKPNPEKTPQKVTPAINTRSNSNKKLKRSPIE
SDDDDKAGPPPTPSKGKIPKKETSPSQKGLKDYFKPSKSEIKTEVKLEEKVTESISVESQ
LFAGLVAQFDLDQDLVKFRDEFVRHGGSLTTDTKKADLVFYDADRAVDLEKLRSLYRRSC
RHLNVRWLHSSIENQSRQPYPLYAVLLKC
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgttaggtgttgcgaaatcgaagagtcatattcggtttttaactcgacttggtagcagc
gtcatgggcagcaagcggacggagaatgaggacaatagattggacacatttcgacgcgtt
tgtgatgaaatagctgcggagtcaagctaccttaagaaggttgacaaactacagaatttc
tttgaaaaggggaccagtggctctggcttcgagggcgacacattgctgtgggtgcagttc
ctgataccagtagccaaccagcgcgtctacaatttgcagaacaaggcgctgataaaacta
ttctcacgcattttcaatgccaaccagcagcaaatgcaccttgatctggagcaggatgga
gacgtgtctgagactctacgcaagcattttgccgactcaagcaaactcaagccgcagaag
cagagtaaactatacttgcatgaagtggagaagctgctcacacagctggaggagcgcacc
aaagaggatgaacaaacggaactgttgcaggagctgtgcaagaaggcaaccgatttggat
ttacgcaccttcatcagactggtcaaacaggatctacgtataaatgcacgggccagacat
attctggatgcctttggccctgacgcctatcccgcctatcaatcttctcgcgacctatca
gccatcgtggaacagttttctggcaaaggaaacaaaacctcgaccctaggagaagttaag
aagacaaagaaagtgggattgagcggcggtgggattcaagtaatgacccccatatcgcca
atgctggctaatgcctgcaagtctgtggaggaggcattcaaaaagagccccagcgggctg
tacggtgaagtcaaatacgatggcgagcgcgtacaaatccacaagcaaggcaccgaattc
aagttctttagtcgtaatctgaagcctgtgatggatcacaaaatcaaagctttaaaggac
catataccacgagccttcccaggcgccggcgatatgattctagactctgagataatactg
gtggacacagagtcgggggccatgctaccgtttggcactttgggtgcgcataaaaaacag
acatttgccaacgcttcggtttgtctgtttgtctttgattgcatactctacgatggtgag
gatctgacacagcttgaattccataaacgtcgcaagatactcgaggaaaacatcaatccc
ttgaaatcttatgtgcagctgtccgaatctcagtttctgaagacaaagaacgagctggca
atgatgacggccaaggttttgcatgccaatctggagggtgtcgtactgaagagtcctaat
ggcatttaccagcccggcaagcgcaactggctaaaggtcaaaaaggattaccttttcgaa
ggtaaaatggcagacacagcggatctagttgtgctgggtgcgtggtatggctctgggaaa
aagggaggtgtgctcagcatctttttgatggggtgctacgatgcgcgcgatcgtctgtgg
aaaactgtgaccaaagtccactctggcctggacgatgccaccaacgaggagatacatggc
tcgctgatgaagctaacagagcgagctgatgccaataaaacccccaattggctgctgtgc
aaaaagtctctggtgccagatgtcctggccaaggatccagcaagcatgcctgtgtgggag
atcactggggctgagttcaccaagtccgaggcacacacagcggcaggcatctcgatacgc
tttccaaggataacacgtctgcgcagcgataaaacagcgaaagaggccaatgatttggct
catttggaaaacttgtacgatgcctccaagaagaatgttaacgtggatctgctgttagcc
aattgcgatgaggatgcgctcaatggtaaaccgaatccagaaaagacgccccaaaaagta
acgccagccatcaatacccggtcaaacagtaataaaaaactgaagagatcgcccattgaa
tcggatgatgacgataaagcaggtccgccaccaacgccgagcaaaggcaaaataccaaag
aaagaaacttccccttctcaaaagggccttaaagattatttcaagcccagcaaatcggaa
ataaaaactgaagtaaagctggaggaaaaagtaaccgagtccataagcgtggagagtcag
ttatttgcgggtcttgtggctcaatttgatttagatcaagaccttgtgaaatttagagat
gaatttgtcagacacggaggttctcttactacggatacaaaaaaggcagacctggttttt
tacgatgcagacagagcagtggatttggaaaagctgaggtctctttaccgccgcagctgt
cgtcatctgaacgttcgctggctccattcatccattgagaaccagagtcgacaaccttat
ccgctctatgctgtattgcttaaatgctga

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