Dreissena polymorpha (Zebra mussel): 127840114
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Entry
127840114 CDS
T08834
Name
(RefSeq) ATP-dependent RNA helicase me31b-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
dpol
Dreissena polymorpha (Zebra mussel)
Pathway
dpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127840114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127840114
03036 Chromosome and associated proteins [BR:
dpol03036
]
127840114
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127840114
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127840114
mRNA degradation factors
5'-3' decay
Decapping complex
127840114
Chromosome and associated proteins [BR:
dpol03036
]
Eukaryotic type
Gene silencing
piRNA pathway
127840114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
127840114
NCBI-ProteinID:
XP_052224535
LinkDB
All DBs
Position
7:57256544..57298455
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AA seq
446 aa
AA seq
DB search
MAATKVDTVMNHASLAVDHKGDVNDQGWKNKLKLPPKDTRVKTSDVTNTKGNEFEDFCLK
RDLLMGIFEKGWESPSPIQEASIPIALTGRDILARAKNGTGKTGAYAIPILERIDTNKDE
VQAMCIVPTRELALQTSQILIELSKHIGAKVMVTTGGTNLKDDIMRLYEPVHAIVATPGR
ILDLMNKNLVKIGKCGILVLDEADKLLSQDFKGMLDSIISHLPNDRQILLYSATFPLSVE
QFMKKYLQNPYEINLMDELTLKGVTQYYAFVQEKQKVHCLNTLFSKLQINQSIIFCNSTQ
RVELLAKKITELGYSCFYIHARMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGIDIQAVNV
VINFDFPKHAETYLHRIGRSGRYGHLGIAINLITYDDRFSLHKIESELGTEIKPIPKNID
KALYVAEYHTEPDLDDLPEKTNGAKA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacgaaggtggatactgtgatgaatcatgctagtctggccgtggaccataaa
ggggatgttaatgaccagggatggaagaacaaattaaaattgcctccaaaagacaccaga
gtaaaaacttctgatgtaacaaatacaaaaggcaatgagtttgaggacttctgtttgaaa
cgagacctgctcatggggatctttgagaaggggtgggagtcgccttcgcccatccaggag
gcaagcatccctatagcgctgactgggcgcgacattctggcccgtgccaagaatggtacg
ggcaagacaggagcctatgcaatacccatcctggagcgtatcgacacaaataaagatgaa
gtgcaagctatgtgtattgtgccgacaagagagttggccctccaaactagtcagatccta
attgagctctccaagcatatcggggccaaggtgatggtcaccactggtggaaccaatctc
aaggacgacatcatgaggctctatgaaccagttcatgcaattgtagccacaccaggaaga
atcttggatctaatgaataaaaacctagtgaaaattggcaagtgcggaatcctagtttta
gatgaggctgacaagctcctgtctcaggacttcaagggcatgttggacagcatcatcagc
catctccccaacgacaggcagatcctgctgtactcggccaccttccctctgtctgtagaa
cagttcatgaaaaagtacctccaaaatccatacgagattaacttgatggatgagctgacg
ttgaaaggagtcacacagtactatgcgtttgtgcaagaaaaacagaaggtccattgtcta
aacacactgttctccaagttacaaatcaaccagtccataatcttctgcaactcaacccag
cgtgtggagctactggccaaaaagatcacggagctgggctactcatgtttctatattcat
gcccgaatgaaccagcagcacaggaaccgtgtgtttcacgacttcaggcagggcctatgc
agaaacctagtctgctcagatctgttcacgcgaggtatcgacatccaggcagtgaatgtg
gtgatcaactttgacttcccgaaacacgcagagacctacctgcacaggattggtcgttca
ggacgatatggccatcttggtattgccatcaacctcatcacgtatgatgacaggttttca
ctgcacaagattgagagcgaacttggaacagagatcaaacccattccaaagaacattgac
aaggcgctctacgttgcggagtaccacacagaacccgatcttgatgacctcccggaaaaa
accaacggagccaaggcttaa
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