Dreissena polymorpha (Zebra mussel): 127856584
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Entry
127856584 CDS
T08834
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
dpol
Dreissena polymorpha (Zebra mussel)
Pathway
dpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127856584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpol03041
]
127856584
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127856584
Spliceosome [BR:
dpol03041
]
Complex C
Other components
Step II factors
127856584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
RSRP
AAA_22
AAA_19
nSTAND3
Sigma54_activ_2
AAA_30
ABC_tran
AAA_16
TsaE
PhoH
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
127856584
NCBI-ProteinID:
XP_052248840
LinkDB
All DBs
Position
13:12814659..12872311
Genome browser
AA seq
1207 aa
AA seq
DB search
MDELQKLEHLSLVSKVCTELDNHLGMNDKDLAEFIIALAEKNDTFEAFKKVLLENGAEFG
DSLIANLLRLIQKMKPKPQKHITSEKKVSQELSDLEMKRKLFPGLALPNDVKEKSPDLPE
DCAKDKDVADNMMGELEALMTTAKTMGSKSKAKDSRSRSRSPKRKKKKKSRSRSRSRDRS
RSRSHNKSRSRSRDRKRKKKRDRSYSRSRSRSVERKDRNREEKYRDKDNRRDKKSEKNRG
HEMPVEVEVGQIYSGRVTSIMQFGCFVAVEGVRKKSEGLVHVSQLRREGRVSAVSDVVQK
GQSVKVKVLSYTGNKMSLSMKDVDQGTGRDLNPKQTSEITGGEKDIVNELRNPDRPSAVP
LVSIPEQNETTDRKRVQRMSSPEKWEWQQMMAANVVDVSELPDFDEETGVLPRDDDSDED
IEIEMVEEEAPFLAGHGKQSLDLSPIKIVKNPDGSLSQAAMMQSALQKERREIKQQQRRA
EMNSVPNTSSSEWQDPMADGERKLGSRGIGSQPADLPEWKKHITGGQKASYGKKEKKSIL
EQRQSLPIYKLKDELVKAVNDNQVLVVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPR
RVAAMSVAKRVSEEFGCRLGQEVGYMIRFEDCTSPETKIKYMTEGMLLRECLIDRDLTQY
AIIMLDEAHERTVHTDVLFGLLKEAVKKRKDLKLIVTSATLDAVKFSQYFFESPIFTIPG
RTYPVEILYTKEAETDYLDASMITVMQIHLMEPPGDILLFLTGQEEIDTACEILYERMKA
LGPEVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF
VKQKVYNSKTGMDQLIVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTAVPE
IQRTNLASTVLSLKAMGINDLLTFDFMDAPPMQTLVSAMEQLHALSALDDEGLLTRLGRR
MAEFPLEPMLSKMLIMSVQLGCSDEILTIVSMLSVQNVFYRPKDKQDLADQRKAKFHQIE
GDHVTLLAVYNAWKNNKFSSPWCFENFVQVRTLKRAQDVRKQMLGIMDRHKLDVVSCGKA
TSKVQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVMTTK
EYMREVTAMDPKWLVEFAPKFFKFSDPTRLSKQKKQQKIEPLYNKYEDANSWRISRAFRK
FHTKVTF
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactacagaaacttgagcatctctctctggtttccaaagtatgcacagaactt
gacaaccatttggggatgaatgacaaagatttagctgaattcatcatagcccttgcagag
aagaatgacacctttgaagctttcaagaaagtattactagaaaatggagcagaatttggg
gattcactgattgctaacctgcttcgactgatacaaaagatgaagcccaagccacagaag
cacatcacttcggagaagaaagtctcacaagagttatctgacctggaaatgaagagaaag
ctcttccctggcctggcattacccaacgacgtgaaagagaaatctccggatttgcctgag
gactgtgctaaagacaaagatgttgcagacaatatgatgggagagctggaggcgttgatg
accacagccaagaccatgggcagcaaaagcaaagccaaggacagtcgcagtaggagcaga
tcacccaaaaggaaaaagaagaaaaagtcacgcagtagaagtcgttctcgtgacagatca
aggtcaaggtcacacaataaatcaaggtcaaggtcacgagatagaaagaggaagaaaaaa
agggatcgctcatacagtaggagtaggagcagaagtgtggagagaaaagatcggaacagg
gaggagaagtacagagataaagacaatcggagggacaaaaagtcagagaaaaacaggggt
catgagatgccagtggaggtggaagtggggcagatatactctgggcgagttaccagcatc
atgcagtttggctgttttgtggctgttgagggggtcagaaagaagagtgaaggactcgtg
catgtttcacagttacgtcgtgaaggacgcgtgtcggctgtctctgatgtagtacagaaa
ggtcagagtgtcaaggtcaaggtcctctcatacaccggtaacaagatgagtctgtccatg
aaggatgtagaccaaggtacaggcagggatctcaaccccaaacagacgtctgaaattact
gggggcgagaaagacatcgtaaatgagcttcggaacccagacaggccttcagctgtaccg
cttgtttcgataccggagcagaacgagaccaccgacaggaagagagtgcagcgcatgtct
tcaccagagaagtgggagtggcagcagatgatggccgctaacgtggtcgatgtctcggag
ttgccggactttgacgaggagacaggagtactccccagagatgatgactctgatgaggac
attgagattgaaatggtggaagaagaggccccattcctagcaggccatggcaaacaaagt
ctggatctcagtcctatcaagatagtcaagaacccagatggttcgctgtcccaggccgcc
atgatgcagtcggcgctgcagaaggaacgtcgtgagatcaagcagcagcagcgtagagcc
gagatgaactctgtacctaacacctctagcagtgagtggcaggaccccatggccgacggt
gagagaaagctgggatctcgtggtatcggttcccagcctgcagacctgccggaatggaag
aagcacatcacgggcgggcaaaaggcttcctacggcaagaaagagaaaaagtccatcctg
gaacagaggcaaagtttgccgatatataaactcaaagatgagctggtcaaggcagtgaat
gacaaccaggtgttggtggtgattggggagaccgggtcaggcaagacaacccagataact
cagtacctggcagaggcaggctacactacacgcggtaaaattggttgtacgcaaccccgt
cgtgtggccgccatgtccgtggcaaaacgtgtgtcagaagagtttggctgcaggttagga
caagaggttggctacatgatccgtttcgaagactgcaccagccctgagaccaagatcaag
tacatgactgagggtatgttgctgcgtgagtgcctgatagaccgggatctcacgcagtac
gcaatcatcatgctggacgaggctcatgaacgtacggtgcacaccgatgtgctctttgga
ctcctgaaggaggctgtgaagaaacgtaaagatctcaagctgatagtcacgtctgctact
ctggatgctgtgaaattctcgcagtatttcttcgaatcacccatatttacgatacctggt
cgcacctacccggtggagatcctgtacacaaaggaggcggagaccgactacctggacgcc
tccatgataacagtcatgcagatccacctgatggagccccctggtgacatcctgctgttc
ctgacaggccaggaggagattgacacggcctgtgagatcctgtatgagcgtatgaaggcc
ctgggacccgaggtacctgagctgatcatcctacctgtgtacagcgccttgcccagcgag
atgcagaccaggatctttgaccccgcaccacctgggtccaggaaagtagtcattgcaaca
aacattgcggagacctccctcaccattgacggtatatactacgtggtggacccaggcttt
gtgaagcaaaaggtgtacaactccaagactggcatggaccagcttatagtgacacccata
tcacaggcccaggccaagcagcgtgcaggtcgcgccggcaggactggaccaggcaagtgt
taccggctgtacaccgagagggcgtacagagatgagatgctgcccaccgccgtgccagag
atacagaggacgaaccttgccagtaccgtcctgtcattgaaagcgatgggtatcaacgac
ctgctgacgttcgacttcatggatgctccgcctatgcagaccctggtgtcggccatggaa
cagctgcatgctctcagtgctctggatgatgaggggctgcttaccaggctcggacgcagg
atggcagagttccccctggagcccatgctatccaagatgctcatcatgtctgtacagctg
ggctgctcagatgaaatcctcactatagtgtccatgctgtctgtacagaatgtcttctac
agacccaaggacaaacaagatttggcagatcagaggaaggctaaattccaccagatagaa
ggtgaccatgtaaccctcctggcggtgtacaatgcgtggaagaacaacaagttctccagc
ccctggtgttttgagaactttgttcaggtgcgcaccttgaagcgtgcccaggacgtacgc
aaacaaatgctcggcataatggacagacacaagctcgatgtggtgtcatgtgggaaggca
acctccaaggtacagaaggcaatctgcagtggtttcttccgaaacgcggctaagaaggac
cctcaggaaggctacagaacactagtggacagtcaggtggtgtacatccacccttccagt
gctctcttcaacagacagccagagtgggtgatataccatgaactcgtgatgaccaccaag
gagtacatgcgtgaggtcacggctatggaccccaaatggctggtggagtttgcccccaag
ttcttcaagttctccgaccccacacggctcagcaagcaaaagaaacagcagaagattgag
cccctctacaacaaatatgaggacgccaactcctggagaatttcacgtgccttcagaaag
tttcacacaaaagttactttctga
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