Dreissena polymorpha (Zebra mussel): 127862315
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Entry
127862315 CDS
T08834
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dpol
Dreissena polymorpha (Zebra mussel)
Pathway
dpol03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
127862315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpol03400
]
127862315
Enzymes [BR:
dpol01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
127862315
DNA repair and recombination proteins [BR:
dpol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
127862315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
DNA_ligase_IV
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
127862315
NCBI-ProteinID:
XP_052257350
LinkDB
All DBs
Position
16:complement(10509377..10564465)
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AA seq
914 aa
AA seq
DB search
MASNPSAMVTQTVASKVHFSELCGLLEKISKTQGNDKKKRILQDFVAKWRESHATIHTEN
DKTTDSFYPAMRLLLPHLEKERIAYGIKEHMFAKLLIEVLCLGKDSPDAQRLLNYKAPKT
AKADVGDFASVVYFVLQNRCPSHGTLFIEEVNANLDAIATNNAAKKKDVVRKHIVKLITN
MSALELKWLTRMIVKELKMGLSQASVLSVFHPDAEEFYNVNNNLEKVCRLMHDPNVRIHE
IGISVFSPFTPMLGERASPDKVEKLMEGKPYIIETKFDGERMVLHKNDGDYKFFSRSGNE
YTDTFGSNRYEGNLVPYIYNLFKSDVKNCILDGEMLQFHPETKTYATKAMNTDVKSASKE
GFQPCLQVFDVMFYNDKVLTNLPLRERLGYLEKVFTPCEGRMMISQHREARTNQDCADAL
NEAIDGREEGIMVKNPDSVYRPNTRKGGWFKVKPEYVGGLMDELDVLVVGGYFGVGHRAG
MMSHFLCAVAVPTEDGNKPDIFYSFCKIGSGYSKKELQDFNAKLAEHWQVFDKKSPPTTI
ELAPGFKEKPDAWIEPSNSCIVQIKAAEIIDSERFRCGVTLRFPRVERFRDDKHWYECMT
TTDIKELKEKSGGKLAGGYVELGDTEEPSKKKRKVVTRTVRPTLGEQFRAADTSNVQQVS
KILEGREVCIINGPGGWNKQKLEEKVVECGGTIVQNPGIETYCVVVDRPVFRVSNMLKSN
NYDIVRADWLLRCFDSNTLIPWCPGDMLSTKPSTQHLIQQEFDEHGDSYVEDTDPDCLKQ
IMANITVKPSDKLSNHDIAELEEKYFPDESPYGLFRTCKLYMDSNAVVGEAGTHIKDSSL
DFLTLELRFFGAEISTTLSPDLTHVMVDTRDTSRVPEIKLERRSRARKFHIVTEAWVRAC
MDEGGLVNERTYEP
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaatccctccgcaatggttacacagactgttgcttcaaaagtgcatttctca
gagctgtgtgggttgttggaaaaaatctccaagacccagggtaatgacaaaaagaaacgc
attcttcaagattttgtagcaaagtggagggaatcacatgcaacaattcacacagaaaat
gacaaaacgacagactcattttatccagccatgcgtttgttgttgccacatttagagaaa
gagagaattgcatatggaattaaagagcacatgtttgccaagctgctgatagaggtgctc
tgtcttggcaaggacagcccagatgctcagagactgcttaactacaaagcaccaaagacc
gccaaggctgatgtgggagactttgcaagcgttgtgtactttgtgctgcaaaaccggtgc
ccaagtcatggcacactctttatagaggaggtgaatgccaatctggacgccatagcaacc
aacaatgcggctaagaagaaggatgtagtgaggaaacacattgtgaaactcatcacaaac
atgtcggccctggagttgaagtggctgactagaatgatagtaaaggagctgaagatgggc
ctcagtcaggcctctgtcctgtctgtgttccacccagatgctgaggagttctacaatgtc
aacaataacctcgaaaaggtgtgccgactcatgcatgacccaaatgttcgcatccatgag
ataggcatctcagtgttttccccgttcacacccatgctgggagagcgggcgtcaccagat
aaggtggagaaattgatggaagggaagccatatataattgagaccaaatttgacggagag
agaatggtgctccacaaaaatgatggagactacaaatttttctcaagaagtggtaatgag
tacactgatacctttggctcgaaccggtacgaaggcaatctggtgccttatatctacaat
ctgttcaaatctgacgtaaagaactgtattctagatggagaaatgttacagtttcatcca
gagaccaaaacatatgcaacaaaagccatgaacactgatgtaaaatcagcaagcaaagaa
ggcttccagccatgtctgcaggtgtttgacgtgatgttctacaatgacaaggtgcttaca
aacctcccgctgagagagcgtcttggctacctggagaaggtcttcacaccatgtgaggga
cgcatgatgataagtcagcacagagaggctcgcacaaaccaggactgtgccgatgcactg
aatgaggctatcgatggcagagaggagggtatcatggtcaagaacccggattcagtgtac
agacctaatacacgtaagggaggatggttcaaggtgaaaccggagtatgtcggaggcctt
atggatgagctggatgtgttagtggtgggcggatactttggtgtgggtcacagggcgggc
atgatgtcacactttctatgtgctgttgccgtgccaacagaggatggcaacaaacctgac
atcttctactccttctgcaagattgggtctgggtacagcaagaaagaactgcaggatttc
aatgccaagctcgcagagcactggcaggtgtttgacaagaagagtccacccactaccatc
gagctggcgcccggtttcaaggagaagcctgatgcgtggattgagcccagcaattcatgc
attgtccagatcaaagcagctgagataattgatagtgagaggttcaggtgcggtgttacc
ttgcggttcccgagagttgagcgtttccgtgacgacaaacactggtacgaatgtatgaca
accacagacatcaaagagctcaaggagaagtccggtggtaagctggcaggtggctatgta
gagctgggagacacagaggagccgagcaagaagaaacgcaaggtcgttacccggacagta
cgaccaacgcttggggaacagtttcgggcagcagatacttcaaatgtgcaacaggtgtcc
aagattctggaaggccgtgaggtgtgtattatcaacggccctggcggttggaataaacaa
aagctggaagaaaaagtagttgagtgtggtggaactattgtacagaacccagggatagag
acttattgcgttgtggtagacagaccggtgttccgggtatccaacatgctcaaatccaac
aactacgacattgtcagggcagactggctcctcagatgctttgacagcaatacactcatt
ccatggtgcccaggggatatgctgagtacgaagccctccacacagcatctgattcaacag
gagtttgatgagcatggtgatagctatgtggaggacacagatccagactgcttgaaacaa
atcatggctaatatcactgttaaaccgtcagataagctgagtaaccatgacattgcagag
ctagaagagaaatacttcccagacgaatcgccgtacggtctgttcagaacctgcaaacta
tacatggacagcaatgctgtggtgggagaggccggtacccacatcaaggacagctccctg
gacttcctcaccctggagttacggttctttggtgcggagatctcaactaccctctctcct
gacctcacccatgtcatggtggacaccagagacaccagtcgtgttccagaaattaaactt
gagagacgcagtcgagcacgcaaattccacatagttacagaggcctgggtacgcgcctgc
atggacgagggcgggctggtgaatgagaggacgtatgaaccctga
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