Dreissena polymorpha (zebra mussel): 127869009
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Entry
127869009 CDS
T08834
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127869009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpol03041
]
127869009
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127869009
Spliceosome [BR:
dpol03041
]
Complex A
U2 snRNP components
U2 related factors
127869009
Complex B
127869009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF3928
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
127869009
NCBI-ProteinID:
XP_052267218
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All DBs
Position
2:complement(131247351..131341170)
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AA seq
988 aa
AA seq
DB search
MAKEGRSYRRRSRSKSRDRKKKRSRSKERKERRSRSRDRKRSRSNEIKRSRDRKRSRSRD
RKRSRSKDRRRRDDKRRKRSRSRSRDKSRSKSPKYGEGAIRVKDEPINKEEEQKQLEMEM
QKRRERIEQWRQERKKNIELIPINIAPPSKKWSLEDEESDEEVVATGDDAKDDDDDVDPL
DAYMQSVNEEIKKPEITTSEDANTSTIGATKGKVTMITAVAKKKVDPTVEKGELMLNNTD
LMEYSSEEEEEGLDSAMANMNKKKKELVSTDHSKVYYAPFRKNFYVEIPELARLTPEETE
QMREDLEGIKVRGKNCPKPVREWAEVGVSKKVLECLKKNNFDKPTPIQAQAIPAIMSGRD
LIGIAKTGSGKTLAFLLPMFRHILDQPELDEEDGPIGVILTPTRELAMQITSDAKKFTKT
LGLSAVCVYGGTGISEQIAELKRGCEIIVCTPGRMIDMLAANNGRVTNLRRCTYVVLDEA
DRMFDMGFEPQVNRIIDNIRPDRQTVMFSATFPRQMEALARKILTKPIEIQVGGRSVVCK
DVEQHVVVLEEEQKFFKLLELLGQYQEQGGVIVFVDKQENADDLMKDLMKHAYPCMSLHG
GIDQYDRGSIIQDFKNGDVRLLVATSIAARGLDVKHLMLVVNYDCPNHYEDYVHRCGRTG
RAGNKGTAFTFITPEQVRYAGDIIKALETAESSVPENLQKWWDEYKKQAEVDGIKIKSSS
GFHGKGFKFDESEAMLSSERKKLQKAALGLVDSDEEDPNEDIEQQIEDMFASKKRVTDVS
KSSLAQPIMGNLMAGSAVGKMGANNQLKLEMAKRLAAKINFSKNLGQEAQDITQQATKAI
FGDGSSAAPQVASKTIAEQMAEKINAKLGYTPVIEEDKDQEQDTFKRYEEELEINDFPQT
ARWKVTSREALAQICEYSEAGITVRGTYFPPGKAPKEEEERKLYLAIEATSEMAVQKAKK
EVTRLIKEELIRLQNSYQPINRARYKVV
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaggaaggtcatacagaagaagaagtaggtcaaaatctcgagatcgaaag
aagaagcgttcgagatccaaagagaggaaagagcgaaggtcaagatcaagggacagaaag
cgttcgagatctaatgaaataaaaaggtccagggatcgtaaacgatcaagatctagagac
agaaaacgatcacgttcaaaagaccggagaagaagggatgacaaacgcagaaagagatcc
cgttccagatcgagggacaagtcaaggagcaagtctcctaagtatggcgagggagccatc
agggtcaaggatgagcccataaacaaagaagaggaacagaagcagcttgagatggaaatg
cagaagcgaagagagcgcattgagcaatggcgccaggaaaggaagaaaaacatagagctg
atcccaatcaatattgcaccaccaagcaagaaatggagtcttgaagatgaggaatctgat
gaagaggtggttgccactggagatgatgccaaggatgacgatgatgatgttgatccactt
gatgcttacatgcagagtgttaatgaagaaataaagaaaccagaaataaccaccagtgaa
gatgccaacacaagcaccattggggctactaagggcaaggtcaccatgatcacggcagtt
gctaagaagaaggtggaccccactgtggagaaaggagagttgatgttgaataacactgat
ctcatggagtattcatcagaggaggaagaggaaggcttggactcagccatggcaaacatg
aacaagaagaaaaaggaactcgtgtccacagaccacagcaaggtgtactatgctccattc
aggaaaaacttctatgtggaaattccggagctggccagacttacaccagaagagactgaa
cagatgagggaagatttggaaggaataaaggtgcgagggaaaaactgcccaaaaccggtt
cgagagtgggcggaagttggtgtcagtaaaaaagtgcttgaatgtttgaaaaaaaacaat
tttgataagccaacaccaattcaagctcaggccatcccagccatcatgtcaggccgagac
ctgataggtattgccaagactggcagtggtaaaaccctggccttcctgctgccaatgttc
aggcacatccttgatcagccagagctggacgaagaagacgggcctataggagttatcctg
actccaactcgcgagcttgcaatgcagatcacatctgatgccaagaagttcacgaagacg
cttggtcttagtgccgtctgcgtgtatggtggcactgggatatcagagcagattgccgaa
ctgaaacgaggctgtgagattatcgtctgcacacccgggcgcatgattgacatgcttgca
gcaaataacgggcgggtgaccaacctgcgaagatgtacgtatgtggtgttggatgaggca
gacagaatgtttgacatgggctttgaacctcaggtcaacagaatcattgataatattaga
ccagacagacagacggtcatgttttctgccacattccctcgacaaatggaagctcttgcg
aggaagattctgacgaagccaatcgaaattcaggtcggaggtcgcagtgtcgtctgcaaa
gatgtggaacagcatgtggttgttttagaggaggagcagaagttcttcaagcttctagaa
ctgttgggacagtaccaagagcagggtggagtgatagtgtttgtggataaacaggagaat
gcagatgacctcatgaaggacctcatgaagcatgcctacccatgcatgtccctgcacggg
ggcattgatcagtatgaccggggcagcatcatccaggatttcaagaacggggacgtcagg
ctgctggtggcaacatctattgcggccagaggtcttgatgtgaagcacttgatgctggta
gtcaactatgactgtccaaaccattatgaggactacgtacacagatgtggtcgtacagga
cgggctggtaacaagggcacagcattcacatttatcaccccagagcaggtgcgttatgca
ggggacataatcaaggccctagaaacggctgagtcatctgtccctgaaaaccttcagaag
tggtgggatgagtacaagaaacaggctgaggtggatggcataaaaatcaagagcagcagt
ggtttccatggtaaagggttcaagtttgacgagtcagaggcgatgttgtcatcagagagg
aagaagcttcagaaggcagcgctgggcctggttgactcagatgaagaggatccaaatgag
gatattgagcagcaaattgaggacatgtttgccagcaagaagcgagtgacggacgtgtcc
aaatcttcacttgcacagcctatcatgggcaacctgatggcaggcagtgctgtgggcaag
atgggcgccaacaaccagttgaaactggagatggccaagcgtctggctgcaaagatcaac
ttcagcaagaaccttggtcaggaggcccaggatatcacccagcaagccaccaaggctatc
tttggggacgggtcatcagctgcaccacaagtggcgtcgaagacaatagctgagcagatg
gcagaaaagatcaatgcaaagttaggctacactccagtaattgaggaggacaaggatcag
gagcaggacactttcaaacgctacgaggaagaacttgagatcaatgatttcccacagacc
gccaggtggaaggtcacttcaagggaggcccttgcccagatctgtgagtactcggaggcg
ggtatcacggtgcggggcacgtacttcccgccaggcaaggcacccaaggaggaggaggaa
cgcaagctgtacctcgccatcgaggccaccagcgaaatggccgtgcagaaggccaagaag
gaggtcacgcggctcatcaaagaagagctcatacgtctgcaaaactcataccagccaatc
aaccgtgcccgttacaaggtcgtctga
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