KEGG   Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_25751
Entry
DICPUDRAFT_25751  CDS       T02090                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
dpp  Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03030  DNA replication
dpp03410  Base excision repair
dpp03420  Nucleotide excision repair
dpp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dpp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DICPUDRAFT_25751
   03410 Base excision repair
    DICPUDRAFT_25751
   03420 Nucleotide excision repair
    DICPUDRAFT_25751
   03430 Mismatch repair
    DICPUDRAFT_25751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpp03032]
    DICPUDRAFT_25751
   03400 DNA repair and recombination proteins [BR:dpp03400]
    DICPUDRAFT_25751
Enzymes [BR:dpp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DICPUDRAFT_25751
    6.5.1.6  DNA ligase (ATP or NAD+)
     DICPUDRAFT_25751
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     DICPUDRAFT_25751
DNA replication proteins [BR:dpp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DICPUDRAFT_25751
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     DICPUDRAFT_25751
DNA repair and recombination proteins [BR:dpp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DICPUDRAFT_25751
   NER (nucleotide excision repair)
    Other NER factors
     DICPUDRAFT_25751
   MMR (mismatch excision repair)
    Other MMR factors
     DICPUDRAFT_25751
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 10509313
NCBI-ProteinID: XP_003283408
JGI: Dicpu1_25751
UniProt: F0Z7Q7
LinkDB
Position
Unknown
AA seq 648 aa
YHPIDDAMWKKGDSLPYMALAKTFETIESYSSRLVIIEHLTNLFRSIMLLSPKDLVMTIY
LSINKIGPSYEAKELGIGDHILIKSVAESTGRTVDAIKQELVEVGDLGIIAQNARMTQPL
MFSPPPLTIASVFKTFQQIADTSGTGTGSQKKKMDQIKKLLIACKDCESLYIIRSLQGKL
RIGLAERSVLMALAKAVLVTPPSTEFPPKVIDIRKNMRPEEFEEKYSNTVAKVTRAYSQL
PNYDLFVPHLCEKDGIDNILKTCSLNVGIPVKPMLAQPTTGITQMLDRFTDMEFTCEFKY
DGERAQIHYLEDGSVHIYTRNLEDYTGKYPDIAANVKKFIGPNVKSFILDCEAVAFDKAT
KKILSFQVLSTRARKSVQLDQIKVPVCVFAFDLLFLNGKNLINEPFYKRREVMVENFVPS
DGVFSFAKYANISDVNDIQSYLEEAVEGNCEGLMVKTLKEKSIYEPSRRSYNWLKIKKDY
MQGMTDSLDLVPIGAWYGKGKRTGTYGAYLLACYDEDNEEFQTLCKIGTGFSDKDLSSFT
EQLKPHVINQPRNMFRISDSIKPDVWLSPSQVWEVLAADLSISPVHTAAYGNLESNKGIA
LRFPRFIRTREDKSPEDATSSEQVVLMYQNQKINNHNSESKPQKDEDY
NT seq 1947 nt   +upstreamnt  +downstreamnt
tatcatccaattgatgacgctatgtggaaaaaaggtgattcattgccatatatggcgttg
gctaaaacatttgaaaccattgaatcctattcaagtagactggttattattgaacactta
acaaatctttttagatcaattatgttactctctccaaaagatttagtaatgacaatttat
ttatcaattaacaagattggtccatcatatgaagctaaagaattgggtattggtgatcat
attttaattaaatctgttgcagagtctacaggtcgtacagtggatgccatcaaacaagaa
ttggtagaagttggtgatttaggtattattgcacaaaatgctagaatgacacaaccatta
atgttttcccctccacctcttaccatcgcatcagtatttaaaacattccaacaaattgca
gatacatctggtaccggtactggtagtcaaaaaaagaaaatggatcaaattaaaaaactt
ttaattgcatgtaaagattgcgaatcattgtacatcattcgttcgcttcaaggtaaactt
agaattggtttagcagagcgttccgtattaatggcattggccaaagctgttttagttact
cctccatcaactgaattcccaccaaaagttatagacattagaaaaaatatgagaccagaa
gaatttgaagagaaatattcaaatactgtcgccaaagttactcgtgcctacagtcaatta
ccaaattacgatttatttgtgccacatttatgtgaaaaagacggtatcgataatatatta
aaaacctgttcactcaatgtcggtattccagttaaaccaatgttagcccagccaactaca
ggtattactcaaatgctcgatcgttttactgatatggaatttacttgtgaattcaaatat
gatggtgaaagagcccaaattcattatttagaagatggatcagtacatatctacacaaga
aatcttgaagattacaccggcaaatatccagatatcgctgcaaatgtaaagaaatttatt
ggtccaaatgtaaaatcattcattttggattgcgaagccgttgcatttgataaagccact
aaaaagattctttctttccaagttctctcaactagagctagaaagagtgtacaattagat
caaattaaagtaccagtttgtgtgtttgccttcgacttacttttcctcaatggtaaaaat
ctcatcaacgaaccattctataaacgtcgtgaagttatggtagaaaactttgtaccatcc
gatggtgtgttttcatttgccaaatatgccaatatttctgatgtcaatgatattcaatca
tatcttgaagaagctgtagaaggtaattgtgaaggtcttatggttaaaacactcaaagag
aaatcaatttacgaaccatcccgtcgttcatataactggcttaaaatcaaaaaagattac
atgcaaggtatgaccgatagtttagatttagttccaattggagcatggtatggtaaaggt
aaaagaacaggtacatatggggcatatttattagcatgttacgatgaagacaatgaagaa
ttccaaacactttgtaaaattggtacaggttttagcgataaagatttatcttcatttaca
gagcaattaaagccacatgttattaatcaaccaagaaatatgttccgtatatctgactct
attaaaccagatgtttggttatcaccatcacaagtttgggaagttttagctgctgatctt
tcaatttccccagttcacactgctgcatatggcaatttagaatcaaacaaaggtatagct
cttcgtttcccacgtttcattagaactagagaagataaatcacctgaagatgcaacatca
tctgaacaagttgttttaatgtatcaaaatcaaaaaatcaataatcataattcagaatca
aaaccacaaaaagatgaagattattaa

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