Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_29296
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Entry
DICPUDRAFT_29296 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03013
Nucleocytoplasmic transport
dpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICPUDRAFT_29296
09122 Translation
03013 Nucleocytoplasmic transport
DICPUDRAFT_29296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_29296
03041 Spliceosome [BR:
dpp03041
]
DICPUDRAFT_29296
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
DICPUDRAFT_29296
Spliceosome [BR:
dpp03041
]
Complex C
Other components
EJC/TREX
DICPUDRAFT_29296
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
DICPUDRAFT_29296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
10502873
NCBI-ProteinID:
XP_003285454
JGI:
Dicpu1_29296
UniProt:
F0ZDE5
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MQDNLIKLFDKIIKKEIDVYNDNEDKNETNDSEMKELEEEEALQPTTTTTIPTSIFNKDK
LINELSSQFPSFDINKIEIKSSIDINIRLFFNILIKEKNTTYEDIDVTIQLAYIFIDIFG
LDSILPLQLSEDLYETKTINECLKLFGLLESRAELFSQDPEIIKGRKRNLLLKICVELLK
RFSRSSNPDSCGRILLFLAYVFPLSDPSGLNGKGEHNVHPEESLDFQNDIMKNIEDGSSE
DQTIDKNFYTQFWGLQTIFQNPQTVLFNNITATSITLNKAKWDSFIQALELVIGSFSTHI
NLEDLQQSNPTKQHYFTKYLTSSNLMKLQLKDSTFRRNILTQILITFQNLDLTGQKYPTL
FNDLQVNIIIAFKTIYHYFLFINFIKNIIQDLTIKCYKILSNTQPGGEYFSNCLSSILKR
EKNWIIWKRDNGCKNFERPPCSPIVKKKKPVSKKSNRMVMGNVELSRLWNLSGGVTDRSY
LKTQNSVLLESLIDPLTEEQIEFEEKQKQERLRLERIKKKEEKRLEQNGIKQAEYEKDKK
EFFEIEANKGKEYPEFEEVQKEIDSDDLSDLDEPKQLKKDNPLYVWKTLRLISRKKLDLF
KYQKFDEIIQSFIKPITPISTTPTVTTTASTATTTDSTTPTESVKSNNSSPIQKPQEIAS
VITQTE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataatttaattaaactatttgataaaattataaaaaaagaaatagatgtatat
aatgataatgaagataaaaacgaaacaaacgattcagaaatgaaagagttagaggaagag
gaagctttacaaccaacaacaacaacaacaatccccacctccatttttaataaagataaa
ttaattaacgaactatcgagccagtttccatcgttcgatatcaacaaaatagaaattaaa
agctcgattgatattaacattagacttttctttaatatattaattaaagaaaaaaataca
acatacgaggacattgatgtaaccattcaattagcatatatatttattgatatatttggt
ttggatagtattttaccattgcaattatcagaagatttatatgaaactaaaacaattaac
gaatgtttaaaactatttgggttattggaatctagggcagaattattttctcaagatcca
gaaattattaaaggtagaaaaagaaatttattattaaaaatctgtgtagaattattaaaa
agattttcaagatcatcaaacccagactcttgtggtcgtattttattatttttagcatat
gttttcccactatcagatccctctggtttaaatggtaagggtgaacataatgttcatcca
gaagaatcattagatttccaaaatgatataatgaaaaacattgaagatggtagcagcgag
gatcaaaccattgataaaaacttttatacccaattttggggacttcaaactatatttcaa
aacccacaaactgtattattcaataacatcactgccacaagcattacattaaataaagcc
aaatgggattcatttatacaggcattagaattggttattggttcattttcaacccacatc
aatctcgaggatcttcaacaatcaaatccaacaaaacaacattattttaccaaatattta
actagtagcaaccttatgaagttacaattaaaagactcaacctttagaagaaacattctt
actcaaattttaataacatttcaaaacttagatttaactggtcaaaaatacccaactcta
tttaacgatttacaagtaaatataattatagcttttaaaacaatctaccattacttttta
tttattaattttattaaaaatataattcaagatttaacaataaagtgttataaaatttta
tcaaacacccaaccaggtggtgaatatttttcgaattgcctttcatcaatattaaagaga
gaaaagaattggattatttggaaaagagataatggttgtaaaaactttgaaagaccacct
tgcagcccaatagttaaaaagaaaaaaccagtatcaaagaaatcaaatagaatggttatg
ggtaatgtagagctatcaagactttggaatcttagtggtggtgttaccgatcgttcctat
ttaaaaacgcaaaactctgttttattagaatcacttatcgacccattaacagaagaacaa
atagaatttgaagaaaaacagaaacaagagcgattgagattagagagaataaagaagaag
gaagaaaaaagattggaacaaaatggaattaaacaagctgaatatgaaaaagacaaaaaa
gagtttttcgaaatagaagctaacaaaggtaaagaatatccagagtttgaagaggtccaa
aaagaaattgattctgatgatttaagcgatttagatgaaccaaaacaattaaaaaaggat
aacccattatatgtttggaagactttaagattaatatcaagaaaaaaattagatttgttt
aaataccaaaaatttgatgaaattattcaaagctttattaaaccaataacaccaatctca
acaacaccaacagtaactacaactgcctcaacagcaaccaccactgactctaccacacca
actgaatctgtaaaatcaaataatagttctccaatccaaaaacctcaagaaatagcatct
gttataacccaaacagaataa
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