Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_31198
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Entry
DICPUDRAFT_31198 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03022
Basal transcription factors
dpp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DICPUDRAFT_31198
09124 Replication and repair
03420 Nucleotide excision repair
DICPUDRAFT_31198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpp03021
]
DICPUDRAFT_31198
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_31198
Transcription machinery [BR:
dpp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DICPUDRAFT_31198
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DICPUDRAFT_31198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
10504031
NCBI-ProteinID:
XP_003286637
JGI:
Dicpu1_31198
UniProt:
F0ZGU8
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MKVFQYLTTLDARDLEDLYKDSWTCQAIVRSLPPRAKQYIFKMLMVDTYPLTIAKDWSQH
SSNHQHKEALKKLFDLKIILLNRGKQQSEQSIQLNPLFQENIKSALVEFDKVIFSNSSNI
KDTNKIPNINDLDNYSKKQWEQVLYFLSDDAAQPSKFISDLLLSSNLTRRDQDGSLSITS
DGFKFLLKDVYTQIWTLLIVYLNDLEKKRREGLTQGSRNDLLGFLFRLSFLQLGKGYLVG
ELTELQKEYLICLKQFGLIYMKSDASLFFYPTRLIISLTTGKTLSLIQTLAVDKINSSSN
SANTVASSTIEKKESGYIVLETNYRLYAYTASSLQISLLSLFVKMLYRLPNLAVGIITRE
SIRTALIHGITADQIIDFIRHNAHPNAVNNGQPIPDVVAEQILLWEQERNRITYTKSVLY
NSFPTTDCYHATLKFAKEQDYYIWSNDQLKTLVVNENGNDPIRNFIKKNFA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtttttcaatatttaacaacattagatgcaagagatttagaggatttatataaa
gattcatggacatgtcaagccatcgttagatcattacctccaagagcgaaacaatatata
ttcaaaatgttaatggtagatacatatccattgacaattgccaaagattggtcacagcat
tcatcaaaccatcaacataaagaggcattaaaaaagctatttgatttaaaaattatatta
ttaaacagaggtaaacaacagtcagagcaatctattcaattaaatccattgtttcaagaa
aatataaaaagtgcattagtagaatttgataaagttatattttcaaatagtagtaatatt
aaagatactaataaaataccaaatataaatgatttagataactattcaaagaagcagtgg
gaacaagttttatattttctatcggatgatgcagctcaaccatcaaaattcatttcagat
ttactattatcgagtaatttaactagaagagatcaagatgggtcattatcgatcacaagt
gatggtttcaagtttttattaaaagatgtatatacacaaatttggacattgttgattgtg
tatctcaacgatttggaaaagaaaagacgagagggtttaacacagggctcaagaaacgat
ttgttgggttttctttttagactttcttttttacaattgggcaaaggttatttggttggc
gagcttacagaactacaaaaagaatatttaatatgtctcaagcaatttggtttgatatat
atgaagtctgatgcaagtttatttttttatccaacacgtttaattatatcattgaccacc
ggtaaaacactatcattgatccaaacattagcagtagataaaataaatagctcatccaac
agcgccaatactgtcgcaagcagcactatcgaaaagaaggaatcaggctatatagtttta
gaaaccaattacagattatatgcatatacagcatcatcattacaaatatcgttattatcg
ttgtttgtaaagatgctttatagactacccaatttagcagtaggcattatcactcgtgag
agtattagaaccgctctaattcatggtattaccgccgatcaaattatagatttcattaga
cacaatgcccatcccaatgcagtaaacaatggtcaacccattcccgatgtggtagcagag
caaatattactatgggaacaagagcgtaatcgtattacctacaccaaatcagttttatat
aattcttttccaacaaccgattgttatcatgcaactttgaaatttgcaaaagaacaagat
tattacatttggtccaatgaccaactaaaaactttggtagttaatgaaaatggtaatgat
ccaataagaaattttattaaaaagaattttgcataa
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