Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_36877
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Entry
DICPUDRAFT_36877 CDS
T02090
Name
(RefSeq) TFIIH subunit
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03022
Basal transcription factors
dpp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DICPUDRAFT_36877
09124 Replication and repair
03420 Nucleotide excision repair
DICPUDRAFT_36877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpp03021
]
DICPUDRAFT_36877
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_36877
Transcription machinery [BR:
dpp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DICPUDRAFT_36877
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DICPUDRAFT_36877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
zinc_ribbon_15
FHIPEP
Motif
Other DBs
NCBI-GeneID:
10504504
NCBI-ProteinID:
XP_003290148
JGI:
Dicpu1_36877
UniProt:
F0ZRU7
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MSRGTNNSSALNKRINKSLFDEEDGPVHVLQVGDEDGKSKYKWEKELEKSWLDIREDEHG
LRVSVEKERSNRNRRLKSTNIDIQRVRRGMQRHLCLVLDLSKTLANQDLKPSRYQVLIQN
TEQFIKEFFDQNPISQLSIIITKNSKAEKISELSGNPQRHIQAMKDAIAMEGEPSIQNSL
DVAISSLCYVPKYGSREVLFLFSSLTTCDPTDLAKTIQTLKQENIRVSFIHLAAELYICR
HIAEQTNGTSKVILNEEHFLENLYSKCQPPPTIGKVEAALVEMGFPQQITSSVPSTCICH
EKMKYSGYICPRCGVKSCELPTDCQICNLSLVSSPHLARSYHHLFPIPLFEEVNWKELNT
NVTCYSCLTSSETSILSLFFSCPRCDQVFCLECDMYIHEALHNCPGCENNLNTINNHNNN
NGH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggggtacaaataacagtagtgcattaaataaaagaattaataaatcattgttt
gatgaagaggatggaccagtgcacgtattacaggttggtgatgaagatggtaaaagtaaa
tataaatgggaaaaagaactggagaagtcatggttggatattagagaagatgaacatggt
ttaagagtgtctgtggagaaggagcgtagcaatagaaatcgtagattaaagagtacaaat
atagatattcaaagggtacgtcgtggtatgcaaagacatttatgtttagttttggattta
tcaaagacattggcgaatcaagatctaaaaccatcaagatatcaagtattgatccaaaat
acagaacagtttattaaagaattttttgatcaaaacccaatttcgcagctatcaatcatc
ataaccaagaatagcaaagcggaaaagattagtgaattaagtggcaaccctcaaagacat
atacaggcaatgaaagatgcaattgcaatggaaggagagccctcaattcaaaactcactg
gatgttgctatatcatccttgtgctatgtcccaaaatatggcagtagagaggtattgttt
ttgtttagcagtttaacaacttgcgatcctacagatctcgccaagactatccaaacatta
aagcaagagaatataagagtttcatttatacatttagcagcagaactttatatttgtaga
catatagctgaacaaactaatggaacatcaaaagtaattttaaacgaagaacacttttta
gagaatctatattccaaatgccaaccacctccaactattggtaaagttgaagctgcttta
gttgaaatgggtttcccccagcaaattacctcatcggtaccctcaacatgtatttgtcat
gaaaaaatgaaatattcaggttatatttgtccaaggtgtggagttaaatcatgtgaatta
ccaactgattgtcaaatttgtaatttatctttagtatcatcaccacatttagcaagatct
tatcatcatttatttccaattccactatttgaagaggttaattggaaggaattaaataca
aatgttacatgttatagttgtttaacctcatcagaaacgtcaatattatcattattcttt
tcttgcccgcgttgtgatcaagttttttgtcttgaatgtgatatgtatatacatgaagct
ttacacaattgcccaggatgcgaaaataatttaaatacgataaataatcataataataac
aatggccattaa
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integrated database retrieval system
