Dermatophagoides pteronyssinus (European house dust mite): 113796123
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Entry
113796123 CDS
T05775
Name
(RefSeq) uncharacterized helicase C17H9.02-like
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
dpte
Dermatophagoides pteronyssinus (European house dust mite)
Pathway
dpte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113796123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpte03019
]
113796123
03041 Spliceosome [BR:
dpte03041
]
113796123
03009 Ribosome biogenesis [BR:
dpte03009
]
113796123
03016 Transfer RNA biogenesis [BR:
dpte03016
]
113796123
Enzymes [BR:
dpte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113796123
Messenger RNA biogenesis [BR:
dpte03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
113796123
Spliceosome [BR:
dpte03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113796123
Complex C
U4/U6.U5 tri-SnRNP related factors
113796123
Ribosome biogenesis [BR:
dpte03009
]
Eukaryotic type
Pre-60S particles
Helicases
113796123
Transfer RNA biogenesis [BR:
dpte03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
113796123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Helicase_C
MTR4-like_stalk
ResIII
Helicase_dom4_arc
Motif
Other DBs
NCBI-GeneID:
113796123
NCBI-ProteinID:
XP_027202164
UniProt:
A0A6P6YBY9
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MDVHSSNVGLMTGDACYNQEAAILIMTTEILHSILFKGSQLLREVKWVIFDEVHYMRDKE
RGVVWEETIVLLPESVKLIFLSATIPNSIEFANWIAKIKNSPCHVISTNFRPTPLRHYLF
PSGGNHLILVQNELRKFQYNNVKHALESINETDNTAEPKKKRRFKEDSNQLTNQELDIKK
LLNLCISSKYLPIIVFAFSKKEVENNAQIFCNLDLTTEQEKIAIEEVYNSALEIVSSEDR
KLPQFSTHLAYLRTGIGVHHGGLLPIIKEITEILFQENLLKILFSTETFSMGINMPARSV
IFTGLQKFDGERQRMITPGEYTQMSGRAGRRGIDTRGYSIVLLTSKYKEEQLERLFTGSA
LMLSSQFYLKYSTILNLLRIQGLSPMFIIKKSFFKFQLGSKRLQLEEDLKDLNKKIANLN
VPAMYNTVFYNASNVNEDPDKIKLDERILLMLDTTNYDLAKYSIETYLEMGLSDYYAMVN
ANLNNFSSALMMPTFDWLSGKSFSYICSTYKLYEGTIVRSFKRIEEVLQEACSVAHLLGS
TSLEELLIETLKLHRHGIIFTSSLYLVE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggatgttcactcttctaatgttggtctcatgactggagatgcttgttataaccaggaa
gctgctattttaattatgacgacagaaattttgcattctattttgttcaaaggaagccag
ctgttgcgagaagttaaatgggtgatattcgacgaagttcactacatgcgtgacaaagaa
cgcggggtcgtgtgggaagaaactatagttttgttaccagaatcggtcaaactaattttt
ctgtctgctactataccgaactctattgagtttgctaactggattgcaaaaataaaaaat
agtccgtgccatgtaattagtacaaattttcgacctactccactgcgccattatttgttt
cctagtggaggaaatcatttaattctggttcaaaacgaattaagaaagtttcaatacaat
aatgtcaaacacgcactagaatcgatcaatgaaactgacaatactgcagaaccaaaaaag
aagagacgttttaaagaagattcgaaccaacttacaaaccaagaactagatataaaaaaa
ttgttgaatttgtgtatctcttccaagtatctccccattatagttttcgcgttttcaaag
aaagaggtcgaaaacaacgctcaaattttttgtaacttagatttgactacagaacaagaa
aaaattgctatcgaggaagtgtacaacagtgcgcttgaaatagtgtcatctgaagataga
aaactacctcagttcagcacacatctcgcatatttacgcacaggaattggagtccatcat
ggtggactgttaccaatcatcaaggaaatcacggaaatcttgtttcaagaaaacctgctt
aaaattctgtttagcacagaaacttttagtatgggaattaacatgcctgctaggtctgtt
attttcacaggtctgcaaaaattcgatggcgaacgtcagcgcatgataacgcctggagaa
tatactcagatgagtggaagagctggaagaaggggaatagatacgcgtggatacagtatc
gttcttttaacctctaagtataaggaggaacagcttgaaaggctgtttaccggatcagct
cttatgctttctagtcaattctatttgaagtactctacaattcttaatttacttcgtatc
caaggactttcgcctatgttcattataaaaaagtctttttttaaatttcaacttggttca
aaaagattacaactggaagaagatctgaaagacttgaataaaaaaatagcaaacttgaat
gttcccgccatgtacaacacagttttctacaatgcttcaaacgtcaacgaagaccctgac
aaaattaaactggacgaaagaatccttctcatgctcgacacgacaaattatgatttagcc
aaatacagcatagaaacgtatctcgaaatgggattaagtgattattatgctatggttaat
gccaatctaaacaatttttcatcggctcttatgatgcctacgtttgactggctaagcggt
aaatctttttcatacatctgttcgacttataaactttacgaaggaacaatagtacggtcg
tttaaacgtatcgaagaggttttacaagaagcttgttctgttgcacacttattgggtagt
acttctttggaggaattgttgatagaaactttgaagttacacagacatggaataatattt
acaagcagtttatatttagtagaataa
DBGET
integrated database retrieval system
