Dryobates pubescens (Downy woodpecker): 104296673
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Entry
104296673 CDS
T08526
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpub01002
]
104296673 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104296673 (USP47)
Enzymes [BR:
dpub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104296673 (USP47)
Peptidases and inhibitors [BR:
dpub01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104296673 (USP47)
Ubiquitin system [BR:
dpub04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104296673 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
104296673
NCBI-ProteinID:
XP_009894804
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MFWNCRQSIFAEMKKKFSQVERAAEEPRVLCIIQDTTNSKTVNERVTINLPASTPLKKLF
EDVALKVGYVNGTFDLMWGNGDNVIDTTPLDQNSDKTLLDAGFEPGKKNFLHLTDKDGEQ
PHLMLESSSATDDSAQDRFIGPLPREGSVGCSNDYVSQSYSYSSVLSKSETGYVGLVNQA
MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETT
DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLEC
GYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDAR
KGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFIDVEDEKSPQTESC
TDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGSEKSSLLYELFSVMV
HSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSRGYYSSAFASST
NAYMLIYRLKDPTRNAKFLEANEYPEHIKQLVQKERELEEQEKRQREIERNTCKIKLFCM
HPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLEEAVPLDCCRLVKYDEFHDYLERSYEG
EEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHVVDLKTESVAPPISV
RAYLNQTVSEFKQLISKATNLPAETMRVVLERCYNDLRLLNVSSKTLKAEGFFRSNKVFI
ESSESLDRHVAYTESHLWKLLDRHANTIRLYVSLPEQSPGPQFRRTVYQKSSGDSGNLDE
ACERVKGPVGNRKSVEAILEESTEKLKSLSLRQQQEGNNGDSSKSTEASDFENIESPLNE
IDSSASAENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNV
DNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYMYF
KAEPYAADEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSPHFKVFRVYASNQEFES
VRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKGMTVRQ
SKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEILD
GAEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSEISGIPLENIEFAK
GRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNE
LMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgttttggaattgcagacaaagtatctttgctgaaatgaagaagaaattttcacaggta
gaacgtgctgctgaggaacccagggtgttgtgtataatacaggatactacaaattccaag
acagtgaatgaacgtgttaccataaacctgccagcttctacaccacttaaaaaactcttt
gaagatgtggctttgaaagtgggctatgtgaatggaacttttgatttaatgtgggggaat
ggagataatgtaattgatacgactccattagatcagaacagtgacaaaactctcctggat
gctggttttgagccagggaagaagaacttcctgcatttgacagacaaggatggtgagcag
cctcatttaatgctggagtcgtcaagtgcaacagatgacagtgcacaagacagatttata
ggccctcttccaagagaaggctctgttggctgtagcaatgactatgtcagtcaaagctat
tcttattcttcagtcctgagcaagtcagagacaggttatgtggggctagtaaatcaagca
atgacttgctacttgaacagccttctacaaacgcttttcatgactcctgaatttagaaat
gcattatataaatgggaatttgaagagtctgaagaggatcctgtgacgagtattccctac
cagcttcaaagactgtttgttttactgcagaccagcaaaaaaagagcaattgaaacaaca
gatgttacacggagttttggatgggatagtagtgaggcatggcaacagcatgatgtccaa
gagctttgtagagtcatgtttgatgctttggaacagaaatggaagcaaacagaacaggcc
gatcttataaaccagctgtatcaaggcaaactgaaggactatgtaagatgcctggaatgt
ggttatgaaggctggagaatcgacacctacctggatatccctttggtcatccggccgtac
ggctccagccaggcatttgctagcgtggaagaagcactgcatgctttcattcagcctgag
atacttgatggccccaatcagtatttttgtgaacgatgtaagaagaaatgcgatgcaagg
aagggtctgcgcttcttgcattttccatatctgctgacgttacagctgaagcgatttgac
tttgattatactactatgcacagaattaaactcaatgatcgtatgacctttcctgaagag
ttagacatgagtgtcttcattgatgttgaagatgagaagtctcctcagactgagagttgc
actgatagtggagctgaaaatgaaggcagttgtcacagtgatcagatgagcaatgatttt
tctaatgatgatggcgttgatgaaggaatctgccttgaaagcaatagtgcagcagaaagg
atttctaaagctggcagtgaaaagagttctttattgtatgagctcttttctgttatggtt
cattctggaagtgctgctggtggccattattatgcctgtataaaatcttttagtgatgac
cagtggtacagctttaatgatcagcatgttagcaagataactcaggaagatattaagaaa
acatacggtggatcttctggaagcagaggctattattccagtgcttttgctagctccaca
aatgcatacatgctgatatatagactgaaggatccaacaagaaatgcaaagtttcttgag
gcaaatgagtatccagagcatattaaacaactggtacagaaagagagagaattggaagaa
caagaaaaaagacaacgtgaaattgaacgcaacacttgcaagattaaattgttctgcatg
catcctacaaaacaaataatgatggagaacaaattagaggttcataaggacaggacactg
aaggaagctgtggaaatagcttacaagctaatggacttggaggaagccgttcctttggat
tgctgtcgtcttgtcaaatatgatgagtttcatgactacttggagcgatcttacgaagga
gaggaggatacaccaatgggtttattacttggaggtgtcaaatcaacctacatgtttgac
ttgctgttggaaacaagacgacctgaccaaattttccagtgttacaaacctggtgaggtc
atggtaaaggttcacgtagttgatctaaagactgagtctgttgctcctccaattagcgta
cgagcttatctgaatcaaactgtttcggaatttaaacagctaatttcaaaggctacaaac
ctgcctgctgaaacaatgcgggtagtattagagcgttgctacaatgacttgcgtcttctg
aacgtctccagcaaaacactgaaagctgaaggcttttttagaagcaacaaggtatttatt
gaaagctcagagtctttagatcgtcatgtggcatatacagagtctcatttatggaagctt
ttggatcgccatgcaaatacaatccgactgtatgtttcattaccggagcagtcacctgga
cctcagtttagaagaacagtgtatcagaagtctagtggagattcaggcaacttggatgaa
gcctgtgaaagagtaaaaggacctgtaggtaacaggaaatctgtagaggcgattctggaa
gaaagcactgaaaagcttaaaagcttgtcccttcggcagcagcaggaggggaataacgga
gacagcagcaaaagcacagaagccagtgattttgaaaacattgaatcgcctttaaatgaa
atagactcttcagcctctgcagaaaacagagaacttgaaaatcaaattcagatttctgat
cccgaaaatctccagtccgaggaacggtcagactcggatgtaaataatgacaggagtaca
agttcggtagacagtgatatcctcagctccagtcatagcagtgatactttatgcaatgtg
gacaatgccccgcttcccttggcaaatggacttgattctcacagtatcacaagtagtagg
cgatcaaaagcaaatcaagggaagaaagaaacatgggacacggcagaagaagattctgga
acagatagtgaatatgatgaaagtggaaagagtagaggagaagcacaatatatgtacttt
aaggcagaaccctatgctgcagatgaaggttcaggagaagggcaaaaatggcttatggtg
catgttgataaaagaattacactgtctgccttcaagcaacatttggagcctttcgttgga
gttccatctcctcacttcaaagtctttagagtctatgccagcaatcaagagttcgagagt
gtcaggctgaatgagaccctttcgtcattttctgatgacaataagataacgattagactt
ggaagagcccttaaaaagggtgaatacagagtcaaagtctatcagcttctggtaaatgag
ccagagccatgcaagtttcttctagatgcggtttttgctaaaggaatgactgtccggcag
tccaaagaggaactacttcctcagcttcgagagcagtgcggcttagacttgacaattgac
aggtttcgcctacgaaagaaaacttggaagaacccaggcactgtgtttctggattatcat
atctatgaagaagacatcaatatttccagcaattgggaggtcttcttagaaatacttgat
ggagcagaaaagatgaaatcaatgtcacagcttgctgttttatcgagacgatggaggcca
tcagagatgaaactagattctttccaggaagtagtattagaaagcagtagtgttgaagaa
ttaaaagagaagctgagtgaaataagtggaatacctttagaaaacatagaatttgcaaag
ggcagaggaacatttccatgcgacatttccatactagagattcaccaggacttggactgg
aatcctaaagtatctacgttgaatgtctggcctctctatatttgtgatgatggtgcagta
atattttatagggataaaactgaagaattaatggaattaacagatgagcagagaaatgaa
ctgatgaaaaaagaaagcagcaggctccagaaaactggacaccgggtaacctactctcct
cgtaaagaaaaagcactaaaaatttatctggatggagcaccaaataaagatttgactcaa
gactga
DBGET
integrated database retrieval system
