Dryobates pubescens (Downy woodpecker): 104297320
Help
Entry
104297320 CDS
T08526
Symbol
AP4E1
Name
(RefSeq) LOW QUALITY PROTEIN: AP-4 complex subunit epsilon-1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104297320 (AP4E1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104297320 (AP4E1)
Membrane trafficking [BR:
dpub04131
]
Endosome - Golgi transport
Others
AP-4 complex
104297320 (AP4E1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
Coatomer_b_Cpla
B2-adapt-app_C
Motif
Other DBs
NCBI-GeneID:
104297320
NCBI-ProteinID:
XP_009895537
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MSDVVERTLSVLPGLLGQHDLGVGLRGAGGPGRVSATSRLGSLIRSITALTSKHEEEKLI
QQELTSLKATVSAPTTTLRLMKECMVRLIYCEMLGYESSFGYIHAIKLAQQGNLLEKRVG
YLAVSLFLHENHELLLLLVNTVVKDLQSTNLVEVCMALTVVSQIFPREMIPAVLPLIEDK
LQHSKEIIRRKAVQALYKFYLIAPNQVQHIHDKFRKALCDRDAGVMAASLHIYLQMIKES
SSAYKDLTGSFVTILKQVVGGKLPVDFNYHSVPAPWLQIQLLRILGLLGKDDPRTSELMY
DVLDESLRRAEINHNITYAILFECVQTIYTIYPKSELLEKAAKCIGKFVLSPKINLKYLG
LKALTYVIQQDPNLALQHQMTIIECLDHPDPIIKRETLELLYRITNGQNVIVIVQKMLDY
LKESKEEYAIINLAGKIAELAEKYAPDNEWFIQTMNAVFSVGGDVVHPDIPNNFLRLLAE
GFDDGKEDNQLRIYAVQSYLALLKEEDALYPQKFLQVMSWVLGEYASLVTDVDPEVILTK
LHSLLKKTYVTSETKVWLMAAVTKLASHTSSSMTVDKLIQEFSNSLDTCMRQHAFELKHL
CEDKALMKSLLPFDASCNDIVVDASLSFLDGFVAEGLGCGAAPYKPHHQRQQEKLSQEKA
LNFEPYGLSFASSVSSSGITGRQSPAGLSFGSDTSGNSAETGHKETNTLKLEGVRKLWGK
EGYLPKKQSKVXDEPQTVSCGSLLAGQMGEPPVSQSDQVASLSEEDKEKQQLASTLFIGL
GSSASVSLMGKADTATQKFKRKSKISATQSSEDVTDFQNSAASDFGPLLDTVPINMEDCE
GRKNPKLXXXXXXXSSDIVEDNTAFETSQSLKTSGLDDGLLDSRMSQSSLFDGNIEIFQP
SPSSHCESASKIPLVLCLPEELEGLAHSEVVELCQSEALALYFCKVWTDDSLLLTVFVSN
KTTSAFNTVNLVFEETEHFQVLESPTYQFPVIEAQSVKLCQRCVWMDKFCTQGILSGSVS
YQSEMETCLEFSITLSLLDFIRPMAMTTEDFGKLWLSLSNDVKQNIKLSSSEDSFSAALN
TLQQKLKLHIVDIIGNEGILACQLLPSVPCLLHCRTHSGMLALWFRSPCSALPDGLLYQC
QKVMEES
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtagtggagcggacgctgagcgtgcttcccgggctgctggggcagcacgac
ctgggtgtcgggctgaggggcgccgggggccctggcagggtttccgccacctcccggctc
gggagcctcatccggagcatcacggcgctcacttccaagcatgaagaagaaaaactaatc
cagcaggagctcaccagtttgaaagcaacagtttcagcccctaccacaacacttagacta
atgaaagaatgtatggtgagactcatctactgtgaaatgctggggtatgagtcttccttt
ggatatatccacgcaatcaagcttgcacaacaaggaaatcttttggagaaaagagttggt
tacttggcagtttctttatttctacatgaaaatcatgaactgctgcttctacttgtgaac
acagttgtgaaggacttacagagcactaatctagtagaggtgtgcatggcattaactgtc
gtgagccagatctttccacgggagatgattccagctgttcttcccctaatagaagataag
ctccagcattctaaggaaattatccgaagaaaagctgttcaggctttatataaattctat
ctcattgctcctaaccaagttcagcatatccatgataagttccggaaagccttatgtgac
agggatgctggagtcatggctgcttctttgcatatttatcttcaaatgattaaggagagc
tcatctgcatacaaggacttgactgggagctttgtaacaatcctaaagcaggtagtggga
ggaaagcttcctgttgacttcaactatcacagtgtgccagcaccatggctacagattcag
cttctaagaatactggggctgttaggaaaagatgatccaaggacaagtgaattgatgtat
gatgttctagatgaatctttaagaagagcagagataaatcataatattacatatgccatc
ttatttgaatgtgtccagacaatttataccatctatcccaaatctgaactacttgaaaag
gctgccaagtgcattggaaaatttgttttgtcacccaaaattaacttgaaatacttaggt
ttaaaggctttgacctatgttatccagcaggatcctaatctagcacttcagcaccagatg
acaataattgaatgtctggaccatccagatcctattattaaaagggagactttagagctt
ctctatagaattacaaatggacagaatgtaattgtcatagttcagaaaatgcttgactac
ttaaaagaaagcaaagaagaatatgctatcatcaacttagctggcaaaatagcagagctg
gctgagaaatatgcccctgacaatgagtggttcatccaaacaatgaatgcagtgttttca
gttggaggtgacgttgtgcatcctgatatcccaaacaactttctgaggttgttggctgaa
ggatttgatgatggaaaagaagataatcagctacggatctatgcagtgcaatcttactta
gcattacttaaagaggaagatgcattgtatccgcagaagttccttcaagttatgagttgg
gtgttgggggaatatgccagccttgttacagatgttgatccagaagttattttgacaaag
ctacacagtctgctgaagaaaacatatgttacttctgaaactaaagtgtggctaatggct
gcagtcaccaagttagcgtcacatacatctagttcaatgacagtcgacaagctaatccaa
gaattcagcaactctctagatacctgcatgagacagcatgcctttgaattgaagcatctg
tgtgaagacaaagcactgatgaaaagcttacttccatttgatgccagttgcaatgacata
gtggtagatgcttccttatcttttctggatggttttgtggccgagggacttggttgtggt
gcagcaccgtataaacctcatcaccagagacaacaggaaaaactttctcaggaaaaagct
ctgaattttgaaccttatggattgtcatttgcttcaagcgtgtcctcatctggcatcact
ggcaggcagtcccctgctggtttatcttttggttctgatacgtctggtaatagcgctgag
acagggcataaagagacaaatactctgaaacttgaaggagtacgcaagctgtggggaaaa
gaaggctatcttccaaagaaacaaagcaaagtannagatgagccacaaactgtttcttgt
ggcagcttattagcaggacaaatgggtgagcctcctgtatcacaatctgatcaagttgcc
agcctttctgaggaagacaaagagaagcaacagttagcatcgactttgtttattggccta
ggatcaagtgctagtgtcagtctgatggggaaagcagacacagctactcagaagttcaaa
agaaaatcaaagataagtgcaactcaaagcagtgaggacgtgacagacttccaaaatagt
gctgcttctgattttggtcccttactcgacacagtacctattaacatggaagactgtgag
ggaagaaaaaacccaaagttaagnnnnnnnnnnnnnnnnnnntcttccgatattgtagaa
gataatacagcatttgaaacatctcagtcactgaaaacatctgggctggatgatggactt
ttagacagcaggatgtcacagtcatctttgtttgatggtaatattgaaatttttcagcct
tctccaagttctcactgtgaaagtgccagtaaaatacccttggtcctttgcctaccagaa
gagctagaagggctcgctcattctgaagtagtggaactttgtcagagtgaagccttagct
ctctatttctgtaaggtgtggacagatgactctctcttgctcactgtttttgtttcgaat
aaaaccacttctgcatttaatactgtgaacttagtgtttgaagaaacagaacactttcag
gttttggagagtcccacctaccagtttcctgtaattgaagctcaaagtgtgaaactttgc
cagagatgtgtgtggatggacaaattctgcacacaaggaattctttctggctctgttagt
taccagtcagagatggaaacctgccttgaattttcaataactttatcattgctggacttc
atcaggccaatggcaatgactacagaagactttggaaagctgtggttgtctctttccaac
gatgtgaaacaaaacattaaactctcatcttctgaagattccttttcagcagctctgaat
acactgcagcaaaagttgaaactccacatagttgacattataggtaatgagggcatactg
gcatgccagctccttccatctgtgccctgtctgctgcactgtcgcactcactcagggatg
ctggctctgtggttcagatcgccttgttctgctcttccagatggtttgctgtatcagtgt
caaaaggtgatggaggaatcttag
DBGET
integrated database retrieval system
