Dryobates pubescens (Downy woodpecker): 104298190
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Entry
104298190 CDS
T08526
Name
(RefSeq) RNA-directed DNA polymerase from mobile element jockey-like
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104298190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpub03009
]
104298190
03016 Transfer RNA biogenesis [BR:
dpub03016
]
104298190
03029 Mitochondrial biogenesis [BR:
dpub03029
]
104298190
Enzymes [BR:
dpub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
104298190
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
104298190
Transfer RNA biogenesis [BR:
dpub03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
104298190
Mitochondrial biogenesis [BR:
dpub03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
104298190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RVT_1
Motif
Other DBs
NCBI-GeneID:
104298190
NCBI-ProteinID:
XP_009896535
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
REAKAHLELKLASDVKDNKKSFYKYINSKRKGRDNLHSLVDMEGNVVSQDEEKAEVLNTF
FTSVFTSWKERLPDSWPAELAEGARELHNFPVFHEQVIGALLSSLDPHKSMGPDGIHPRV
LRELADELAKPLSIIFHQSWLTGEIPADWKRANVVPIHKKGRLDEPGNYRPVSLTSVPGK
IMEQVILSAITQHLEDGQGIRPSQHGFRKGRSCLTNLISFYDQVTRLVDVGRPVDVVYLD
LSKAFDTVPHSKLLAKLSAHGLDGSTLRWVRNGLEGRAQRVVVNGATSSWQPVTSGVPQG
SVLGPLLFNIFIDDLDEGIESIISKFADDTKLGAGVDLLEGREALQRDLDRLGSWAESNG
MRFNTSKCRVLHIGHSNPMQSYRLGSEWLESSQAERDLGVLVDGRLNMSLQCAQAAKRAN
GIPVSMGWIRKGMTSRLREGLLPLCSAL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
agggaggcaaaagcacatttggaacttaaactggcctctgatgtgaaggacaacaaaaag
tccttctataaatatattaatagcaagaggaagggcagggacaacctccactccttggtt
gacatggagggaaatgttgtatcacaggatgaggaaaaggcagaggtacttaacaccttc
tttacctcagtttttactagctggaaagaacgtctaccagacagctggcctgcagaactg
gcagaaggagctagggagctgcataatttccctgtgttccatgagcaagtgataggagct
ctcctcagcagcttggacccccacaagtccatgggaccagatgggatccatcctagggtg
ctgagagagctggcagatgagctggccaaaccactctccattatttttcatcagtcctgg
ctcactggagagatcccagctgactggaagcgggccaacgtggtacccatccacaagaag
ggccggttggatgagccagggaattacaggcctgtcagcctgacctcagtgccaggaaag
attatggagcaggtcatcctgagtgcaatcacacaacacttagaggatggccaagggatc
aggcccagccagcatgggtttaggaagggcaggtcctgcctgaccaacctgatctccttc
tatgatcaggtgacccgcctggtggatgtggggaggcctgtggatgtagtctacctggac
ctcagcaaggcctttgacaccgttccccatagcaaactcctggccaagctgtcagcccat
ggcttggatgggagcacactgagatgggttaggaacgggctggagggccgagcccagaga
gtggtagtgaatggtgccacatccagctggcagccagtcaccagtggtgtgccccaggga
tcagtactgggccccttgctctttaacatctttattgatgatctggacgagggcatcgag
tccatcatcagtaaatttgctgacgacaccaagctgggggcaggagttgatctgctggag
ggtagagaggctctgcagagggacctcgacaggctgggcagttgggcagagtccaacggc
atgagatttaacacatccaagtgccgggttctgcacattggccacagcaaccccatgcag
agctacaggctggggtcagagtggctggagagcagtcaggctgagagggacctgggggtg
ctggtcgacggtagactgaacatgagcctgcagtgtgcccaggcagctaagagggccaat
ggcatccctgtgtccatggggtggattagaaagggtatgaccagtaggttgagagagggt
cttctccccctctgctctgcactg
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