Dryobates pubescens (Downy woodpecker): 104302335
Help
Entry
104302335 CDS
T08526
Symbol
NBEA
Name
(RefSeq) LOW QUALITY PROTEIN: neurobeachin
KO
K24183
neurobeachin
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104302335 (NBEA)
Membrane trafficking [BR:
dpub04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
104302335 (NBEA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Laminin_G_3
Neurobeachin
WD40
DUF4800
PIGA
Motif
Other DBs
NCBI-GeneID:
104302335
NCBI-ProteinID:
XP_009901142
LinkDB
All DBs
Position
Unknown
AA seq
2892 aa
AA seq
DB search
MGELRASGSGSVVLPAGMINPSVPIRNIRMKFAVLIGLIQVGEVSNRDIVETVLNLLVGG
EFDLEMNFIIQDAESITCMSELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQ
VLLKMSTVDDMIADLLVDMLGVLASYSITVKELKLLFSMLRGENGIWPRHAVKLLSVLNQ
MPQRHGPDTFFNFPGCSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLYC
FRTSKGVGYSAHFVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEI
RCYVNGQLVSYGDMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAVYVFTEALNPAQI
FAIHQLGPGYKSTFKFKSESDIHLAEHHKQVLYDGKLASSIAFTYNAKATDAQLCLESSP
KENPSIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLHDSQVETT
VCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLSFAKYLD
GLSHGAPLLKQLCDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATIYNTIRRVGTVLQ
LMHTLKYYYWVVNPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDE
LQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVIYKLLASKSESIW
VQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTYNTLYEILTEQVC
TQVVHKPHPEPDSTVKIQNPMILKVVATLLKNSTPSAELMEVRRLFLSDMIKLFSNSREN
RRCLLQCSVWQDWMFSLGYINPKNSEEQKITEMVYNIFRILLYHAIKYEWGGWRVWVDPL
SIAHSKVTYEAHKEYLAKMYEEYQRQEEENIKKGKKGNVSTISGLSSQTTGAKGGMEIRE
IEDLSQSQSPESETDYPVSTDTRDLLMATKVSDDVLGNSERPGGGVHVEVHDLLVDIKAE
KVEATEVKLDDMDLSPETLVTGENGALVEVESLLDNVYSAAVEKLQNNVHGSVGIIKKNE
EKDNGPLITLADEKDEPSTNSTSFLFDKIPSQEEKLLPELSSNHISIPNVQETQMHLGVN
DDLGLLAHMAGSVDITCASSIIEDKEFKIHTTSDGMSSISERELASSSKGLEYAEMTATT
LETESSGSKTVPSVDAGSIISDTERSDDGKEAGKEIRKIQTTTTTQAVQGRSVTQQDRDL
RVDLGFRGMPMTEEQRRQFSPGPRTTTRGPVYIFRQFTCKVFPLCPRKMDSLFAKNTSIX
TCYFNHFFLIHDFFCSCSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILP
LLSAATSPTGSKTELENIEVTQGMSAETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNM
SSGGLMRQCLRLVCCVAVRNCLECRQRQRERVNKISLIGSKTQDALQGVTAAAATKAPLE
NVPGNLSPIKDPDRLLQDVDINRLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDI
LEPQRETARSGSQAGRNIRQEINSPTSTETPTVFPENIKDKETPTPVEDIQLESSIPHTD
SGIGDEQMPSILNGTDLETSTGPDAMSELLSTLSSEVKKSQESLTESPSEILKPASSISS
ISQSKGINVKEILKSLVAAPVEIAECGPDPIPYPDPALKREAQAILPMQFHSFDRSVVVP
VKKPPPGSLAVTTVGAATAGSGLPPGSTPNIFAATGATPKSMINTTGAVDSGSSSSSSSS
SFVNGATSKNLPAVQTVAPMPEDSAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTL
LGSHGQELLIEGLVCMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAM
KDHIVRVANEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDHV
TANQLKQKILNILTNKHGAWGAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHSDAL
LKAAVEYGTEEGVVKSKKTFRSQAVVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVL
STPAQLIAPVVVAKGTLSITTTEIYFEVDEDDPAFKKIDPKVLAYTEGLHGKWMFSEIRA
VFSRRYLLQNTALEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLA
TPRQLYKSSNMTQRWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDL
TLPGNFRDLSKPIGALNPKRAVFYAERYETWEDDQTPPYHYNTHYSTSTSTLAWLVRIEP
FTTFFLNANDSKFDHPDRTFSSVARSWRNSQRDTSDVKELIPEFYYLPEMFVNSNGYNLG
IREDEVVVNDVDLPPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRA
LNVFHYLTYEGSVNLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQ
SPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVG
LRGAPGYSLDQAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILI
CGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWS
GRHHIIGDNPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLL
RALEGTENCLYPRLISVSSEGHCIIYYERGRISNFSINGKLLAQMEINDSTRAILLSSDG
QNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNID
FNRWHYEHQNRY
NT seq
8679 nt
NT seq
+upstream
nt +downstream
nt
atgggggagctgagggcgtcgggctcggggtccgtggtgctccccgcggggatgattaac
ccatcggtgccgatccgcaatatccggatgaaattcgccgtcctcatcggactcatccag
gtcggggaggtcagcaaccgggacatcgtggagacggtgctgaacctgctggttggtggt
gaatttgatctagagatgaactttataatccaggatgcagagagcattacatgtatgtca
gagcttctggagcactgtgatgtaacgtgccaagcagaaatttggagtatgttcacagca
attctccgtaaaagtgtccgtaatttacagactagcacagaagttggcttaattgaacag
gtactgctgaagatgagtactgtggacgacatgattgcagatcttctagttgatatgttg
ggggttcttgccagctacagcatcactgtcaaagagttgaagcttttgttcagcatgctt
cgaggcgaaaatggaatctggccaagacatgcagttaaactattatcagttcttaatcag
atgccacagagacatgggcctgatacctttttcaacttccctggctgtagtgctgcagca
attgcattgcctcctattgctaagtggccttatcaaaatgggtttactcttaacacctgg
tttcgtatggatccactaaacaatatcaatgtagataaggataaaccctatctctattgt
ttccgcacaagcaaaggtgttggatattctgctcattttgttggcaactgcttaatagtt
acgtcactgaagtcaaaaggcaagggtttccagcactgtgtaaagtacgactttcagcca
cgcaagtggtacatgataagcattgtacacatctataatcgatggagaaacagtgaaata
cgatgttatgtgaacggtcagctggtatcctatggcgacatggcctggcatgttaacacc
aatgatagctatgataaatgttttcttggctcttcggagacagcagatgctaatagagtg
ttctgtggccagcttggagcagtgtatgtattcactgaagcactcaacccagcacagata
tttgcaatacatcagttaggacctggatataagagcacattcaaatttaaatctgaaagt
gacattcatctggctgagcaccataaacaagtgctatatgatgggaaacttgcaagtagc
attgcttttacttacaatgcaaaggctactgatgctcagctatgccttgaatcctcacca
aaggaaaatccttcaatttttgtacactccccccatgctcttatgcttcaggacgtgaaa
gctatcgtaacccactccattcacagtgcaattcattccattggaggaattcaagttctg
tttcctctttttgcccagttagacaatagacagctgcacgacagtcaggtggaaacaaca
gtttgtgctaccctgttggctttcttggttgagcttcttaaaagttcagtagccatgcaa
gaacaaatgcttggtggaaaaggttttctagtcattggctatctccttgaaaagtcatcc
agagttcatataaccagagcagttctggagcaatttttgtcatttgcaaaatatttggat
ggattgtctcacggagcacctctactgaagcagttatgtgatcacatcctttttaatcct
gctatctggatacatacccctgcaaaggtgcagctgtctttgtatacctacttgtcagct
gaattcattggaactgctactatctacaacactatacgcagagtagggacagtactgcag
ttaatgcacacgctgaaatactactactgggtggttaatcctgctgatagcagtggcatc
actcctaaaggattagatggtcctcgaccctcacagaaagaaatcatatcactaagagca
tttatgcttctatttttgaaacaacttatactgaaggatcgaggagtgaaagaagatgaa
ctgcagagcatattaaattacttactaacaatgcatgaggatgaaaatattcacgatgtc
ctgcagctgctagtggcactaatgtctgaacatccagcatctatgataccagcctttgat
cagagaaatgggatacgagtaatttataagttattggcttccaaaagtgagagtatatgg
gtacaagctttgaaggtccttggatattttcttaaacacttgggtcataagcgaaaggtt
gaaattatgcatacccatagtcttttcacactgcttggagaaaggttgatgctgcataca
aatactgtgaccgttacaacatataacacactttatgagattttgacagaacaagtatgc
actcaagttgttcataaaccacatccagagccagattctacagtgaaaattcagaatcca
atgattcttaaggtggtggcaacactgttaaagaactccacgccaagtgctgagctgatg
gaagttcgacgtttgttcttatctgatatgataaagctctttagtaatagccgtgaaaac
agaagatgtttacttcagtgttcagtgtggcaggactggatgttttctctgggatacata
aaccctaagaactctgaagagcagaagatcacagagatggtttacaacattttccgcatt
cttttgtatcatgcaataaaatatgaatggggaggctggagagtgtgggtggaccctctt
tctatagctcattccaaggtcacatatgaggctcataaggagtatctagcaaaaatgtat
gaagagtatcaaaggcaagaggaagaaaacattaaaaaagggaagaaagggaacgtcagc
accatctcaggtctttcctctcaaacaacaggagcaaaaggtggaatggaaattcgagag
atagaagacctttctcaaagtcaaagtccagaaagtgaaacagattaccctgttagtaca
gatacaagggacttgctcatggctacaaaggtgtcagatgatgttcttggaaattctgag
agaccaggaggaggagtacatgtggaagttcatgaccttttagttgatataaaagctgaa
aaggtagaagctactgaagtaaaacttgacgatatggatttatcaccagagacactggta
actggagaaaatggtgcacttgtagaagttgagtctcttctagataatgtatatagtgct
gctgttgaaaagctccaaaacaatgttcatggaagtgtgggtattattaagaagaatgag
gaaaaggataatggtccattaataactctggctgatgagaaagatgaaccttctactaac
agtacctcatttctctttgataaaatacctagtcaagaggagaaacttctacctgaactt
tcaagtaatcacatttctattccaaatgtgcaagagacacagatgcatcttggtgtaaat
gatgatttgggattgcttgcacatatggcaggtagtgtagatattacatgtgcttcaagt
ataatagaggacaaggagttcaagattcacacaacttcagatggaatgagtagcatttct
gagagggagttggcttcctcatctaaaggattagaatatgccgaaatgactgccacaact
ctcgagacagagtcatctggtagcaaaactgtacctagtgttgatgcaggaagtataata
tcagatacagaaagatctgatgatggtaaggaggcaggaaaggagatacggaagatccag
acaactaccacaacccaggcggtgcagggtcgatctgtcacccagcaagaccgggattta
cgggttgacttgggatttcgaggaatgccaatgacagaagagcagcgacgacagtttagt
ccgggtccacgcacaactacaagaggtcctgtttatatttttagacaatttacttgcaaa
gtttttcctttatgtccaagaaaaatggatagtctatttgcaaagaatacatctatctaa
acttgttattttaaccatttctttttaatccacgatttcttctgttcttgcagtcactcc
acaaaatctgtgatggactttgtcaatagcaatgaaaatattatttttgtacacaacaca
atacacctcatttcccagatggtagacaatattattattgcttgtggaggaattttacca
ttgctgtcagcagccacatccccaactggttctaagactgaattggaaaatattgaagtg
acacaaggaatgtcagcagagacagcagtaacttttctcagccgtctgatggcaatggtt
gatgtactagtatttgccagctctctaaattttagtgagatcgaagctgaaaaaaacatg
tcttctggaggtctaatgcgacagtgcctaaggcttgtttgttgtgtggctgtgagaaac
tgcttagaatgtcggcagaggcagagagagagagtgaacaaaatttcattaatcggcagt
aaaactcaagacgctcttcagggtgtgactgcagcagcagcaaccaaggctccccttgaa
aatgtccctggcaacctttcccctataaaagatcctgataggcttcttcaggatgttgat
attaatcgtctaagagcagttgtttttcgtgatgtggatgacagcaaacaggctcagttc
ttagctttggccgtagtctactttatttccgttctgatggtctccaaataccgtgatata
ctagaaccacagagagaaactgcaaggtctgggagccaggcaggtagaaatatcagacaa
gaaataaattcaccaacaagtacagagacaccgactgtatttccagaaaatatcaaagat
aaagaaacaccaacaccagttgaagatattcagctggaaagctccattcctcatacagat
tctggaattggagatgaacagatgcccagtattttgaatgggacagacttggagaccagc
acaggccctgatgctatgagtgagctgttgtctactttgtcttcagaagtgaagaaatct
caggagagcttaacagaaagccccagtgaaatcctgaaacctgcatcgtcgatatccagc
atcagccaaagtaaaggcatcaatgtaaaggaaatactgaaaagtcttgtggcagcccct
gttgaaattgcagaatgtggtccggatccaatcccttacccagatcctgcactgaagaga
gaagctcaggctattcttcccatgcagtttcactcatttgacaggagtgtggttgtgcca
gtaaagaagccccctccaggtagtctggctgttaccacagtgggagctgcgacagctggg
agtggactgccaccgggtagtacgcctaatatatttgcagcaacaggagcaacaccaaaa
agtatgattaatacaacaggtgcagtagactcaggatcttcttcttcctcttcgtcatcc
agctttgtgaatggtgctaccagcaaaaatctcccagctgtccaaactgttgctccaatg
ccagaggattcagctgaaaacatgagtatcactgcaaagcttgaaagagctttagaaaag
gtggcccctctcttacgagaaatttttgtcgactttgcccctttcctatcccgaacgttg
ttgggcagtcatggacaagagctgttgattgaaggtctggtttgtatgaagtcaagtacc
tcagtggttgaacttgtcatgctgctttgttcacaggaatggcaaaattctattcagaag
aatgcaggacttgcatttattgagctcatcaatgaaggaagattattatgtcatgcaatg
aaagaccatatagtgcgtgttgcaaatgaagcagagtttattttaaacagacaaagagct
gaagatgtccacaaacacgctgagtttgagtcacagtgtgctcagtatgctgctgacaga
agagaggaggagaagatgtgtgatcatcttatcagtgctgcaaagcatcgtgatcatgtt
acagccaatcaattgaaacagaagatactcaacatactgacaaataagcatggtgcctgg
ggagctgtttcgcacagccaactgcatgacttctggcgcttggattactgggaggacgac
ttgcgccgacggaggcgatttgttcgcaatgcttttgggtctactcattctgatgctctt
ctaaaagctgctgtggaatatggcactgaagagggtgtagtgaagtcaaagaaaactttc
cgaagtcaagctgtggtaaatcagaatgcagaaacagagcttatgctggaaggagatgat
gatgctgttagcctgctccaagagaaagagattgacaaccttgcaggccccgtggtcctc
agcacgccggcacagctcatcgcccccgtggtggtggccaaggggacgctctccatcact
accacagaaatctacttcgaagtggatgaggatgacccggccttcaagaagatcgacccc
aaggtccttgcctatacagaaggccttcatggaaaatggatgttcagtgagattcgggct
gttttttcaagacgttaccttctccagaacacagctttggaagtgtttatggcaaacaga
acttctgttatgtttaattttcctgaccaagcaacagtgaagaaagttgtgtacagctta
ccacgtgttggagtaggaaccagctatgggttgccacaagccaggagaatctctctggcc
actccccgacagctttataaatcctccaacatgactcagcgctggcagagacgggagata
tcaaactttgaatacttgatgttcctcaacactatagcaggacggacatacaatgatctg
aaccaataccctgtatttccatgggtacttacaaactatgaatctgaggagttagacctg
actcttccaggcaacttcagagatctttcaaagcctattggtgctttgaacccaaagaga
gcagttttctatgcagaacggtatgagacatgggaagatgatcagactccaccttaccat
tacaacacccactactccacatctacttctacactggcttggcttgttcgtattgagccc
tttacaacattctttctaaatgcaaatgatagcaagtttgaccacccagatcgaaccttc
tcttcggtagccaggtcttggaggaacagccaaagagatacctcagatgtgaaggaatta
attccagagttttactacctaccagagatgtttgtcaacagtaatggctataatctagga
atcagggaagacgaagttgttgtgaatgatgttgatctgccgccatgggccaagaagcct
gaagactttgtccgtatcaacaggatggcactggaaagtgagtttgtatcatgtcaactt
catcagtggattgaccttatatttggctacaagcaacgaggaccagaagcagtgcgtgca
ctcaatgttttccactacttaacatatgaaggctctgtgaacctggacagtatcactgat
cctgtcctcagggaggccatggaggcgcagatacagaactttggacagacgccatcgcag
ttgctcattgagccccatccacctcggagctctgccatgcacctgtgtttccttccacag
agccccctcatgtttaaagatcagatgcagcaggatgtcatcatggtgctgaagttccca
tcaaattcccccgtcacacacgtggcagccaacacgctgccccatctgactatacccgcc
gtggtgacagtcacttgcagcaggttgtttgcagtcaatcggtggcacaacacagtaggc
ttacgaggagccccaggatattctttggatcaagcccatcatcttccaatcgaaatggat
ccattgattgccaataactctggtgtgaacaagcggcagatcacagaccttgtggatcag
agcatccagatcaatgcacattgcttcgtggtcacagcagataatcgctacattcttatc
tgtggtttctgggacaagagctttagggtttattctacagaaacaggaaagttaactcag
attgtgtttggccactgggatgtcgtgacttgccttgccagatcggagtcctatattggt
ggcgactgctacatcgtgtctgggtctcgtgatgctacattgctgctttggtattggagt
ggtcgacatcatattataggtgacaatccaaacagcagtgattatccagctcctcgtgct
gttctaactggtcacgaccatgaagttgtctgtgtgtcggtctgtgcagagctgggactt
gttatcagtggtgctaaagaaggtccttgtctggtacacacaattactggagatttgctg
agagccctggaaggaacagaaaactgcttgtatcctcgcttaatttcagtatctagtgag
ggtcactgcatcatctactatgaacgaggacggatcagcaatttcagcattaatggcaaa
ctcttagctcagatggagatcaatgattcaaccagggccattcttctgagcagcgatggg
cagaacctggtgacagggggagacaatggtgtagtggaagtatggcaggcctgtgacttc
aagcagctctatatttaccctggctgtgacgctggcataagagctatggatctgtctcat
gatcagagaactctgattactggcatggcttctggcagcatcgtagcttttaatatagat
tttaaccggtggcattatgaacatcagaacagatactga
DBGET
integrated database retrieval system
