Dryobates pubescens (Downy woodpecker): 104304896
Help
Entry
104304896 CDS
T08526
Symbol
USP16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104304896 (USP16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpub01002
]
104304896 (USP16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104304896 (USP16)
Enzymes [BR:
dpub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104304896 (USP16)
Peptidases and inhibitors [BR:
dpub01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104304896 (USP16)
Ubiquitin system [BR:
dpub04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104304896 (USP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zinc_ribbon_9
Motif
Other DBs
NCBI-GeneID:
104304896
NCBI-ProteinID:
XP_009903987
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MGKKRVKDKTSQSDEPSGRLKPVCKHVRKGLEQGHLKKALLNVEWHICQDCQADNKTQEK
SEEETDESPSIWLCLKCGHRGCGRNSQEQHALKHSSTPRSDPHCLVLSLDNWSVWCYMCD
NEVPYDAKSRLGQTVDCIRKQVCTDSLHTVKQQEENKEFENKKVEKDSKNEQEKEISLKE
ESSHSSTSSEVTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMPDATVKIESPELS
MEPQLVKLDQPGPLTLAMYQFLTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHEL
LRYLLDGMRTEEIQQISVGILKTLIDSNKQNEEELKKKIKEYEKKKGIQSFVDRIFGGEL
TSTIMCEECRTVSLVHESFLDLSLPLLDDQKVKITKERNAKQTNEKESEDEEDKNNDCYL
KQRDEPSGPSKHLQKKAKKQAKKQAKSQRRQQKLQEKVLHLTDICAPEQSEKDVEYNREA
EAEINSETPDVKQEEESTNDCRDHCLAEDNLSVQESSTEVQSMHENRGKPEEECVENESL
VDLPMEGLDSPVKLVNGLDNLSLKVEGDENEEDLATDFSKLHLGADAESVLSTLDDLQSI
PTKTCELSAEDSERAFCTLANREDLNLEEGSVQYSLYQFTRNEKLTETNKLLCDVCTQMH
YGPKKNIKSEKKYVYTNARKQMLISLAPPVLTLHLKRFQQGGFNLRKVNKHIKFPEVIDL
APFCTAKCKNVAEGETKVLYSLYGVVEHSGTMRSGHYTAYAKMRNMNNNLSDLVLRGQSP
QASETEPVKGQWFHISDTHVQAVSAAKVLSSQAYLLFYERLL
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacgcgtcaaagacaaaacgtcacagtctgatgagccttcaggtaggctg
aaacccgtgtgcaagcatgttcgtaaaggattggagcaaggccatctgaaaaaggcactg
ctaaatgtggagtggcacatttgccaggactgccaggcagacaataagacacaagaaaaa
tctgaggaggagactgatgaaagcccttcgatatggttatgtctaaagtgtggccatagg
ggctgtggcagaaattctcaagagcagcatgctttaaagcattcttcaacaccgagatca
gaccctcattgcttggttctcagtttggacaactggagtgtgtggtgctacatgtgtgac
aatgaagttccgtatgatgctaagagccgactgggccaaactgtggattgcattagaaaa
caagtttgtactgactcattgcatacagtcaagcaacaagaagagaacaaagaatttgaa
aataaaaaagtagaaaaggacagcaaaaatgagcaagaaaaagaaatctcacttaaagaa
gagagttctcattcaagtactagctcggaagtgaccgtgaaaggacttagtaacttgggg
aatacgtgtttctttaatgcagtgatgcagaatttatcacaaactccagttctgagggag
ctgcttaaggaagctaaaatgcctgatgcaacagtgaaaattgagtcacctgagttatcc
atggagcctcagctggtaaaactagatcagccaggtcctttgacattagccatgtatcag
ttcctgacagaaatgcaagagactaaaaaaggggtagtcactcctaaggaactttttgct
caggtttgtaaaaaagcaatacggtttaaaggttaccagcagcaagacagccatgaattg
cttcgttacttacttgatggaatgagaacagaagaaatccaacaaatcagtgttggaata
ctgaagacactgattgactctaacaaacagaatgaagaggaacttaaaaagaaaattaaa
gaatatgaaaagaaaaagggaatacagagttttgtagaccgaatctttggtggagaatta
accagtacaattatgtgtgaggaatgcagaactgtatctttggtccatgagtccttcctt
gatttgtcacttcctctactagatgatcagaaagtaaaaataacaaaagagagaaatgct
aaacaaaccaatgaaaaggaatctgaagatgaagaagataaaaacaatgactgttatctt
aagcagagagatgagccctccggtccaagtaagcaccttcagaaaaaagcaaagaaacag
gccaaaaaacaagccaagagccagcgccgccagcaaaaacttcaagaaaaggttcttcac
ttgacagacatctgtgcacctgaacagtcagaaaaagatgttgagtataaccgagaagca
gaagcagaaattaactctgaaactcctgatgtgaagcaagaagaggaatcaacaaatgat
tgcagagatcactgcttagctgaagacaatttgagtgtacaggaaagtagtacagaagtt
cagagcatgcatgaaaatagaggaaagccagaagaagagtgtgtagaaaatgagtcactc
gtggatctccccatggaaggcttagattctcctgtaaagttggtcaatggccttgacaac
ctatctttaaaagttgagggtgatgaaaatgaggaagatctagccactgacttttcaaaa
ctacacctgggtgccgatgctgaatccgtcttgagtaccttagatgaccttcaaagtatt
cccaccaagacatgtgaattatcagctgaagattcagaaagagcattttgtactcttgca
aaccgggaagatctgaacctggaagagggttcagtccagtactctttgtatcagtttacc
cgtaatgaaaaacttactgagaccaataaactactctgtgatgtatgtacacaaatgcat
tatggaccaaagaagaacataaaaagtgaaaagaagtatgtttatactaatgccagaaaa
cagatgctcatctctcttgctcctcctgttctgactcttcacttgaagaggtttcaacag
ggtggatttaatctgcggaaggttaacaagcacatcaagtttccagaagtgatagacttg
gctcctttttgtacagctaagtgtaaaaatgtagctgaaggggaaacaaaagtgctgtac
tctctctatggagttgttgaacatagtggaacaatgaggtctgggcactacactgcttat
gctaaaatgagaaacatgaacaacaatctctctgatcttgtccttcgaggccaatctcct
caagcttcagaaactgaaccagtaaaagggcagtggttccacatcagtgatacccacgtg
caagctgtgtctgcagcaaaagtgctgagctcgcaagcctatctcctgttctacgagcga
ctgctctaa
DBGET
integrated database retrieval system
