Dryobates pubescens (Downy woodpecker): 104306679
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Entry
104306679 CDS
T08526
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpub01002
]
104306679 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104306679 (USP4)
Enzymes [BR:
dpub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104306679 (USP4)
Peptidases and inhibitors [BR:
dpub01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104306679 (USP4)
Ubiquitin system [BR:
dpub04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104306679 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Motif
Other DBs
NCBI-GeneID:
104306679
NCBI-ProteinID:
XP_009905971
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MVRQVGKTCLQLGDTWYLVDIRWFKQWKKYVGIDRWDMFDAGDPSLFPGPIDNSGLFADP
ETQRLKEHLIDELDYVLVPTEAWDKLVTWYGCIDGQQPIARKVVEYGLFVKHCKVEVYLL
ELKLCENSDPRNLISCHFSKADTIATIEKEMRKLFNLPAERETRLWNRYRGNTYQQLSKL
DSTVQDEALHQGQVILMEVKNEDGTWPERHFLAEGSGFVCNSYNSRDSPSLSQPGLCGLS
NLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQNNPLGMRGEIAEAYADLIKQMWSG
RQSYVAPRVFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANG
RPDSEVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCYLTLPLPLRR
DRLMEVTLVYADPQRRPVQYRVVVPMMGTVSDLCESLSKLSGVPAENMVVTDVYNHRFHK
IFQVDEGLNLIMPKDDIFVYEVRKTREDGSEDVTLCVYFREKTVRQYSNTAGTVLFGQPL
LISVPKHKLTVEHLYSVVLEQISRYVKLPLAEESSTPCQDKGTCNGSSGVVEGDIEEMEH
QDGVQEGREKVTEVDPCHSEGCMQVESVREMQPCKKQHFTFSLVNSSGTSEISSIVEGKV
LKLNAFSALAVDWDSNTRRLLFDVQEAQAFEKHESMLQTQKKAAVVALRDCIELFTTMET
LGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYSRYWRDKLDTVVEFPIRGLN
MSEFVCDPRAGSYVYDLIAVSNHYGGMGGGHYAAYAKNKVNDKWYCFDDSSVSVASEDQI
VTKAAYVLFYQRRNSEERTAPSPSQEECDGMDTN
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggtaaggcaggtaggaaaaacctgcctccaactgggtgacacctggtacctggtggac
atccgctggttcaaacagtggaagaagtatgtgggcatcgacaggtgggacatgttcgat
gcgggcgatcccagcctcttccctggccctatcgacaattcgggtctgttcgccgatcct
gaaactcagcgtttgaaagagcacctcattgatgagctggattatgtattggttcccacc
gaagcctgggataaactagtaacgtggtacggctgcatagatggacagcagcctattgcc
agaaaagtagtggaatatggtctgtttgtgaagcactgtaaagtggaagtttatcttctt
gagctgaagctgtgtgagaacagtgatcctaggaatttaattagctgccactttagcaaa
gcagatacaattgctaccatcgagaaagaaatgaggaaactatttaatctcccagctgag
agggaaactaggttatggaacaggtataggggtaacacttaccagcagctcagcaagctg
gatagcacagtgcaagatgaagcgctccatcagggtcaggttattctcatggaagtgaaa
aatgaagatggcacatggcctgaacggcattttctggcagaaggatctgggtttgtctgt
aactcttacaacagcagggacagtccttctctgtcacagcctggactctgtggactcagt
aatcttggaaatacctgcttcatgaattctgcattacagtgtctgagcaatacccctcca
ctgacagactatttcctggaagataaatatgaagctgaaataaatcagaataatccactg
gggatgagaggtgaaattgcagaagcctatgcggacctcattaaacagatgtggtctggg
agacagtcctatgtggccccacgtgtgtttaaaactcaagttggccgatttgctcctcag
ttttcaggataccagcagcaagattcgcaggagctcttggcttttcttctagatggcttg
catgaggatttgaacagagtgaagaagaagccctacttggagctgaaggatgccaatggc
agacctgattcggaggtggcaaaagaggcctgggagaatcataggctgagaaatgattct
atcattgtggacatttttcatggccttttcaaatctacacttgtttgtcctaaatgctcc
aaagtatctgtgacctttgatcctttctgttacttaacccttccactgcccttgaggagg
gatcgtcttatggaagttactctggtgtatgcagacccacagcgcagacccgtccagtac
cgggttgtggtgccgatgatggggaccgtctcagatctgtgtgaatcactctccaagctc
tccggtgttcctgcagagaatatggtggtgacagacgtgtacaatcatcggttccacaaa
attttccaagtggatgaaggtttaaatcttatcatgccaaaagacgacatctttgtgtat
gaagttcgcaagacaagagaggatggctcagaggatgtgactctctgtgtttacttccgg
gaaaagacagtgaggcaatacagcaacaccgcaggcactgtcctcttcggtcaaccactc
ttgatatctgtgcccaaacacaaactcaccgtggagcacttgtacagtgtggttttggag
cagatcagccgctatgtgaaactccctttggcagaagaatcctctacaccctgccaagac
aaaggaacctgcaatggctccagtggtgtggttgaaggtgacattgaagagatggagcat
caggatggtgtgcaggaaggcagggaaaaggtgactgaagttgatccctgccactctgag
ggttgtatgcaggttgagtcagtaagagagatgcagccttgcaagaagcagcattttacc
tttagcctggtgaattcctctgggacttctgagataagctccattgtagaaggaaaagtc
ctaaaactgaatgctttctctgctcttgccgtcgactgggattccaacacacggaggcta
ctttttgatgtacaggaggcacaggcatttgaaaaacatgaaagcatgttgcaaacccaa
aagaaggcggctgtggtggccctgagagactgtatagagctcttcacaactatggaaaca
cttggagaacatgacccatggtactgccctaactgtaagaaacatcaacaggccacaaag
aagtttgacttgtggtctttgccccggattttggttgtgcatttaaagcgtttctcatac
agcagatactggagggataaacttgacactgttgtggaattccctatcaggggtttaaac
atgtccgagtttgtctgtgacccaagagcaggctcatatgtgtatgacctcattgcggtt
tccaatcactatggaggcatgggaggaggccactacgctgcctacgcaaagaacaaagtc
aatgacaagtggtactgctttgatgacagcagcgtatcagtggcttcagaagaccaaata
gtgacaaaagctgcatacgtgctgttctatcagcgccgaaacagtgaggagcgtactgcc
ccgtctccttcccaagaagagtgtgacggcatggataccaactaa
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