Dryobates pubescens (Downy woodpecker): 104309817
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Entry
104309817 CDS
T08526
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104309817 (SMARCAL1)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104309817 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
TK
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
104309817
NCBI-ProteinID:
XP_009909483
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MSSGLTEEQKKRIEENRQKALARRAERVAAQRGGQVGVKEQSSGHQRNLKEENDHVRFVR
QHQKNPHSLVEQKSCLQKDYSHYTANQQMAGSHREQQKNCSEVSEQASGIKQFPTNISNS
LSYSHKHLDAGGQEHRQALINLGTFQQPKCYSAFKNPTEPTYPRLIDNRHPDGSKDLQSQ
NESAVKCVLPPSSATPSNLEMLINSSGATDREGGAGASQATGRIQKLISSPGSGSTIEAA
SCKKANSITKGKCVKYGEDRFQVEIGYNAELIAVFKTIPSKNYDPALKKWNFGLEDYSCF
MEAANRLPSVILAPLEGENAVGLASASLCVGRRADVNSLLKMCKDWKKPSALVKGKCVLI
SRLRFEVDIGYSAEVIGMFKQMNSRNYDKNTRKWNFLLEDYPKLMEMLQSLVSVEVEPLP
EAVIQTFAAQIQRSASHTDTPDADLSVVDSKIVSSLMPFQREGVNFAILRNGRLLLADDM
GLGKTIQAICIAAYYRKEWPLLVVTPSSVRFTWAEAFHRWLPSLSPGSTNVIVTGKDNLT
ASLINIVSFDLLSKMDKQLKNTFQVVIIDESHFLKNIKTARCRVAMPLLKAAKRVILLSG
TPAMSRPVELYTQIAAVQPTFFPQFHSFGLRYCDAKKLPWGWDYSGSSNLTELKILLEES
IMIRRLKSDVLSQLPAKQRKMVVVAPEGISAKTKAVLAAEAKKMAQGYKSKQQEKEALLV
FYSKTAEAKIHSVVEYILELLESGNHKFLVFAHHKIVLDAIVAVLDNKHVEYIRIDGSTT
SAERQSLCRKFQNSEKQTVAVLSLTAANMGLTLSAADLVVFAELFWNPGILIQAEDRAHR
IGQTSSVNIHYLVAKGTADDYLWPMIQEKMKVLGEAGLSETNFSETAESTNYCPKPDPKQ
KTIYDLFQRAFSESGDDIDEALLLEAADACCKFDSGSALQDTGGETSSVSPPRKRRMEDF
FQM
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgggccttacagaggaacaaaagaaaagaatcgaagagaaccgccagaaggcc
ttggctaggagagcagaaagggtagcagcccagagaggtgggcaggtgggggtgaaggaa
cagagttcaggccatcagagaaacttgaaggaagaaaatgatcatgtccggttcgttagg
cagcatcaaaagaatccacacagtcttgtggagcagaagagctgtcttcagaaggattat
agtcattacactgcaaaccaacagatggctggctcacatagagagcagcaaaagaattgt
tcagaggtctcggaacaagcaagtggcattaagcagttccctacaaacatctcaaattct
ctaagctattcccataaacacttggatgctggtggtcaggaacacagacaagctttaatt
aatcttggtacattccagcagcccaaatgctactctgctttcaaaaaccctacagagcca
acttatcctagattaattgataacaggcaccctgatggtagtaaagatttacaaagtcag
aacgaatctgctgtaaaatgtgttttgccaccaagcagtgctacgccaagcaatttggaa
atgctgataaactcgagcggcgcaactgacagagaagggggagctggtgcctctcaggcc
actggtaggattcagaagctgatcagctctcctggttcgggctctaccattgaagctgcc
tcttgcaagaaagcaaatagcattacaaaaggaaaatgtgtgaagtacggggaagaccga
ttccaggttgaaatagggtataatgctgaactcatagctgtgtttaagacaataccaagc
aaaaactatgatcctgctctgaaaaaatggaatttcggactggaagactacagctgtttc
atggaagcagcaaatcgacttccgtcagtaattctggcaccgctggaaggggaaaatgca
gttggcttggcatcagcctctctttgtgttggcagaagggctgatgtgaattccctcttg
aagatgtgtaaggactggaagaaaccctcggcccttgtcaaagggaagtgtgtactgatc
tctcgcttgcggtttgaggttgatattgggtactctgcagaagtgattggaatgttcaaa
cagatgaattccagaaattatgataagaacaccagaaagtggaatttccttctggaggac
tatcccaaactaatggaaatgttacagagccttgtgtcagtagaagtagagccgctgcct
gaggcagtaattcaaacctttgctgctcaaatacagagatctgcgtcacacacagacact
cctgatgctgacctttcagttgtggactccaaaattgtgtcaagccttatgccttttcag
cgggaaggtgtgaattttgcaattttaagaaatggacgtttacttctggcggatgacatg
ggcttgggcaagaccatccaggcaatctgcattgctgcctactaccgaaaggaatggccc
ttgctggtggtgactccttcttctgtgaggttcacatgggcagaggcatttcacagatgg
cttccatccttgagtccaggtagcaccaatgtcatagtgactggcaaggacaacctaaca
gcaagcttgatcaacattgtcagctttgatctcctcagcaagatggacaagcagcttaag
aacactttccaagtagttattattgatgaatctcatttcctgaagaacataaaaactgca
cgatgccgagttgccatgcctctgcttaaggctgccaagagagtgatcttgctctcggga
acccctgccatgtcacggcccgtggagctctacacgcagatcgcggctgtgcagccaacc
ttcttcccacagttccactcttttgggctgcgctactgtgatgccaagaagttgccatgg
ggttgggactactctggatcatccaacttaactgaactgaaaattttgctggaagagtcc
atcatgatccgacgtctgaagtcagatgtcctttcccagctcccagccaagcaacgcaaa
atggttgtggtggctcctgaaggcattagtgcaaagaccaaagctgtcttggcagctgaa
gcaaagaagatggcccagggatataaaagtaaacagcaggagaaggaggctcttcttgtc
ttctacagcaaaacagcagaagctaaaatccactcagtcgtagaatacatcctggagtta
ctggaaagtgggaatcataaattcctggtgtttgctcatcacaagattgtgctggatgca
atagttgcagtgctggataacaagcatgttgaatacattcgcattgatgggtccacaaca
tcagccgagcggcagtccctgtgccgcaagttccagaactcagagaagcagactgtggcg
gtgctgtccctcactgctgcaaacatgggcctgacattgtctgctgcggacctggtggtg
tttgcagagctcttctggaacccagggattttgatccaagcagaagatcgggcacatcga
attggacagaccagctctgttaatattcactacctggtggctaaaggcacagcagatgac
tacttatggccaatgattcaagagaaaatgaaagtgctgggggaagctggtctttcagaa
actaatttctctgaaacagctgagtccactaattactgccctaagccagatccaaagcag
aagaccatctacgaccttttccagagggccttctctgagagtggagatgacattgacgaa
gctttgcttctggaggcagctgatgcttgctgcaaatttgactctggcagtgccttgcaa
gatacaggaggagagacaagttcagtgagtccccccagaaagcgacgtatggaggacttt
tttcaaatgtaa
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