Dryobates pubescens (Downy woodpecker): 104310184
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Entry
104310184 CDS
T08526
Symbol
DDX46
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104310184 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpub03041
]
104310184 (DDX46)
Enzymes [BR:
dpub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104310184 (DDX46)
Spliceosome [BR:
dpub03041
]
Complex A
U2 snRNP components
U2 related factors
104310184 (DDX46)
Complex B
104310184 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104310184
NCBI-ProteinID:
XP_009909899
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MSKGIVLVWHYRKRSASRGRSGSRSRSRSPSDKRGKREDRRSRSRERDRRRDRSRSRDKR
RSRSRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKAENRSR
SKEKTDGVEVSKEKKKDKDDKEEEKEKDAPTNTVATENFDQNKLEKXMRKRKERVEKWRE
EQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYM
EEVKEEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAVESEKKKGELMENDQDAM
EYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNV
YRLELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDL
IGIAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTL
GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEAD
RMFDMGFEPQCSDVEQHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDL
MRASYPCLSLHGGIDQYDRDSIINDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNH
YEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGNPIPPDLEKLWADFKDQ
QKAEGKLIKKSSGFSGKGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIES
MFNSKKRVKDMAAPGTSNAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKD
VMQQATNAILRGGTIQAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKR
YEEELEINDFPQTARWKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIE
SANELAVQKAKAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagggaattgttctggtgtggcactaccggaagcgctcagcctcgcggggccgc
tcgggcagccgctcccgcagccgctcgccgtccgacaagagaggcaagcgagaggaccgg
cgctccaggagcagggagcgcgaccgccggcgcgacaggtcccgcagcagggacaagagg
aggtctcggtcccgcgacaggaagcgccaaaggcgttcccgcagcagggagagggagcgg
agccgagagaggaggaggtcccgcagccgcgagaggaggcgctccaggagccgcagcaga
ggcaggaggtctcgctcctccagtcccagcaagaacaggaaagcagaaaacagatcaaga
tctaaagaaaagacagatggagtggaagtttccaaagaaaagaaaaaggacaaagatgac
aaagaagaggagaaggagaaagatgctcccacgaatactgtggccaccgagaattttgat
cagaacaagctagaaaaataaatgagaaaacggaaggaaagagtggagaaatggagggaa
gagcaacgcaagaaggccatggaaaacataggagagctgaaaaaagagattgaggagatg
aaacaagggaaaaagtggagtttagaagatgatgatgatgatgaagaggaaactgcagaa
ggagaaaaggaaggcaatgaggttgaggatgaagagctagatcctctggatgcttatatg
gaagaagtgaaagaagaggtgaagaagttcaatatgaggagtgtgaaaggtggaggtggg
agtgaaaagaaaaccggaccaactgtgaccaaagtagtgactgtggtgacgaccaaaaag
gcagctgtggagtcagaaaagaagaaaggggagctcatggagaatgaccaagatgcaatg
gagtattcctcagaagaggaagaagttgatcttcagactgccctgactggctatcagacc
aagcagagaaagctgctggaaccagtggatcatgggaagatagagtatgagcccttccgg
aaaaacttctatgtagaagtaccagagctggccaaaatgactcaggaagaggttaatgtg
tacaggctggagctggagggaattacagtcaagggaaaaggctgccccaaacccataaaa
acctgggtccagtgtgggatttccatgaagattctcactgccctcaaaaaacatggctat
gagaagcccacccccattcagacccaggctatcccagccattatgaacggccgtgacctg
attggcattgccaagacaggaagtgggaaaaccattgcgttcctgctgcccatgttcagg
cacatcatggatcagagagcgctggaggaaggagaaggtcccatagccgtcattatgaca
ccgactcgcgagctggctctgcagatcaccaaggagtgcaagaaattctctaagacactt
ggacttcgagttgtctgtgtctatggagggacaggaatcagtgagcagatagctgaactc
aaaagaggagctgagattattgtttgcacgccggggcgtatgattgacatgttagcagct
aacaatggccgggtgacaaacctccgcagggtcacctacgtcgttctggacgaggcagac
cggatgtttgacatgggctttgagcctcagtgctcggatgtggagcagcacgtgattgtc
atagaagaggagaacaagtttctgaagctgctggagctgctggggcactaccaggagaaa
ggatcagtgatcatatttgtggacaagcaagagcacgctgatgggttgttgaaagattta
atgagagcctcttacccctgcttgtctcttcatgggggcattgatcagtatgacagggac
agcatcatcaatgacttcaagaatggcatttgcaaacttctggtggccacatctgtagca
gccaggggcctggatgtgaagcagttgatgctggtggtcaactacagctgtcccaaccac
tatgaggactacgtgcaccgagcaggccggacaggacgagcaggcaataaaggctatgcc
tacacattcatcaccgaggatcaggcacgctacgctggggatatcattaaggctttggaa
ttgtctgggaacccaattcctcctgatttggagaagctctgggctgacttcaaagaccag
cagaaggctgaaggaaagctgatcaaaaaaagcagtggattctctgggaaaggttttaaa
tttgatgaaacagaacaggctttggctaatgaaagaaaaaagctgcagaaagcagctctt
ggcttgcaggattcagatgatgaagacacagctgttgatattgatgagcagatcgagagc
atgttcaactccaagaagagagtgaaggacatggcggcgccgggcacgtccaacgccccc
acgccctccgccggcaacgccgagaagctggagatcgccaagcgcctggcgctgaggatc
aacgcccagaagaacctcggagcagaggcacaagtcttggtccccttccacttcaaggat
gtgatgcagcaggctaccaacgctatcctgagaggaggcaccatccaagctcctactgtg
tctgccaagaccattgcagagcagctggctgaaaaaatcaatgctaagctcaattatgtg
cccatagagaagcaggaggaagagaagcaggatggaggacaaaatgaatcctttaagaga
tacgaggaagagctggagatcaatgacttcccacagactgccagatggaaagttacctcc
aaagaagcactgcagaggatcagtgaatactctgaagctgccattacaatcagaggaact
tatttccctccaggcaaagaacccaaggaaggagaacggaagatttacctggctatagaa
agtgccaatgaactggctgtacagaaagcaaaggcagaaatcacacggcttataaaagag
gagctgatcagactgcaaaactcttaccagcccaccaacaaaggcagatacaaagtgctc
tga
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